Basic Information | |||
Gene ID | 778936 | ||
Gene Name | Ci-SWI/SNF; swi/snf | ||
Full Name | Ci-SWI/SNF protein | ||
Organism | Ciona intestinalis [7719] |
Cross Reference | |||
UniProt | Q4H2Q8 | UniGene | Cin.22884 |
PDB | NULL | OMIM | NULL |
KEGG | cin:778936 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 7719.ENSCINP00000008494 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSCINP00000008495 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 790 | 844 | 1.70e-26 | Homeodomain-like |
ENSCINP00000008495 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 878 | 976 | 3.60e-43 | Homeodomain-like |
ENSCINP00000008495 | Pfam | PF00176 | IPR000330 | 135 | 415 | 1.30e-81 | SNF2-related |
ENSCINP00000008495 | Pfam | PF00271 | IPR001650 | 472 | 549 | 3.80e-16 | Helicase, C-terminal |
ENSCINP00000008495 | Pfam | PF09110 | IPR015194 | 698 | 790 | 1.70e-24 | ISWI HAND domain |
ENSCINP00000008495 | Pfam | PF09111 | IPR015195 | 847 | 962 | 8.50e-43 | SLIDE domain |
ENSCINP00000008495 | Pfam | PF13892 | IPR020838 | 36 | 64 | 4.00e-05 | DBINO domain |
ENSCINP00000008495 | ProSiteProfiles | PS51192 | IPR014001 | 144 | 309 | 0.00e-00 | Helicase, superfamily 1/2, ATP-binding domain |
ENSCINP00000008495 | ProSiteProfiles | PS51194 | IPR001650 | 439 | 590 | 0.00e-00 | Helicase, C-terminal |
ENSCINP00000008495 | ProSiteProfiles | PS51293 | IPR017884 | 789 | 841 | 0.00e-00 | SANT domain |
ENSCINP00000008495 | SMART | SM00487 | IPR014001 | 128 | 320 | 8.00e-45 | Helicase, superfamily 1/2, ATP-binding domain |
ENSCINP00000008495 | SMART | SM00490 | IPR001650 | 465 | 549 | 3.20e-27 | Helicase, C-terminal |
ENSCINP00000008495 | SMART | SM00717 | IPR001005 | 790 | 839 | 3.40e-06 | SANT/Myb domain |
ENSCINP00000008495 | SMART | SM00717 | IPR001005 | 892 | 956 | 1.10e-04 | SANT/Myb domain |
ENSCINP00000008495 | SUPERFAMILY | SSF101224 | IPR015194 | 699 | 792 | 0.00e-00 | ISWI HAND domain |
ENSCINP00000008495 | SUPERFAMILY | SSF46689 | IPR009057 | 793 | 843 | 0.00e-00 | Homeodomain-like |
ENSCINP00000008495 | SUPERFAMILY | SSF46689 | IPR009057 | 845 | 969 | 0.00e-00 | Homeodomain-like |
ENSCINP00000008495 | SUPERFAMILY | SSF52540 | IPR027417 | 120 | 347 | 0.00e-00 | P-loop containing nucleoside triphosphate hydrolase |
ENSCINP00000008495 | SUPERFAMILY | SSF52540 | IPR027417 | 349 | 630 | 0.00e-00 | P-loop containing nucleoside triphosphate hydrolase |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSCINP00000008495 | PF00176 | 0 | SNF2_N | SNF2 family N-terminal domain |
ENSCINP00000008495 | PF09111 | 3.09687e-43 | SLIDE | SLIDE |
ENSCINP00000008495 | PF09110 | 1.7e-24 | HAND | HAND |
ENSCINP00000008495 | PF00271 | 1.9e-17 | Helicase_C | Helicase conserved C-terminal domain |
ENSCINP00000008495 | PF11496 | 9.8e-09 | HDA2-3 | Class II histone deacetylase complex subunits 2 and 3 |
ENSCINP00000008495 | PF04851 | 2.1e-06 | ResIII | Type III restriction enzyme, res subunit |
ENSCINP00000008495 | PF00270 | 1.6e-05 | DEAD | DEAD/DEAH box helicase |
ENSCINP00000008495 | PF13892 | 4e-05 | DBINO | DNA-binding domain |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100062897 | 7425 | Nasonia vitripennis | 100117522 |
7029 | Acyrthosiphon pisum | 100162928 | 9823 | Sus scrofa | 100188903 |
61853 | Nomascus leucogenys | 100601677 | 9785 | Loxodonta africana | 100668937 |
8128 | Oreochromis niloticus | 100711188 | 10141 | Cavia porcellus | 100729120 |
34638 | Metaseiulus occidentalis | 100901849 | 9597 | Pan paniscus | 100992321 |
9555 | Papio anubis | 101000396 | 39432 | Saimiri boliviensis | 101040352 |
8083 | Xiphophorus maculatus | 102218085 | 9606 | Homo sapiens | 1107 |
7668 | Strongylocentrotus purpuratus | 583705 | 7070 | Tribolium castaneum | 660820 |
9544 | Macaca mulatta | 700614 | 6087 | Hydra magnipapillata | 100215182 |
28377 | Anolis carolinensis | 100558283 | 400682 | Amphimedon queenslandica | 100642088 |
30195 | Bombus terrestris | 100643266 | 132113 | Bombus impatiens | 100749786 |
7463 | Apis florea | 100871034 | 143995 | Megachile rotundata | 100879945 |
30611 | Otolemur garnettii | 100963648 | 7897 | Latimeria chalumnae | 102354964 |
13735 | Pelodiscus sinensis | 102460963 | 6239 | Caenorhabditis elegans | 175944 |
10116 | Rattus norvegicus | 317575 | 7227 | Drosophila melanogaster | 36390 |
9031 | Gallus gallus | 422457 | 9615 | Canis familiaris | 475451 |
7955 | Danio rerio | 559803 | 9371 | Echinops telfairi | ENSETEG00000017426 |
9669 | Mustela putorius furo | ENSMPUG00000017423 | 9258 | Ornithorhynchus anatinus | ENSOANG00000002862 |
9813 | Procavia capensis | ENSPCAG00000001998 | 132908 | Pteropus vampyrus | ENSPVAG00000006482 |
42254 | Sorex araneus | ENSSARG00000005501 | 9305 | Sarcophilus harrisii | ENSSHAG00000008464 |
37347 | Tupaia belangeri | ENSTBEG00000014973 | 59729 | Taeniopygia guttata | ENSTGUG00000003899 |
9478 | Tarsius syrichta | ENSTSYG00000009954 | 30538 | Vicugna pacos | ENSVPAG00000008982 |
10090 | Mus musculus | 93761 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000015218 |
9913 | Bos taurus | ENSBTAG00000003399 | 9358 | Choloepus hoffmanni | ENSCHOG00000011724 |
9483 | Callithrix jacchus | ENSCJAG00000002868 | 51511 | Ciona savignyi | ENSCSAVG00000004620 |
9361 | Dasypus novemcinctus | ENSDNOG00000009158 | 10020 | Dipodomys ordii | ENSDORG00000003466 |
9365 | Erinaceus europaeus | ENSEEUG00000013176 | 9685 | Felis catus | ENSFCAG00000018496 |
69293 | Gasterosteus aculeatus | ENSGACG00000017238 | 9595 | Gorilla gorilla | ENSGGOG00000012595 |
8049 | Gadus morhua | ENSGMOG00000007519 | 9315 | Macropus eugenii | ENSMEUG00000001267 |
9103 | Meleagris gallopavo | ENSMGAG00000003517 | 30608 | Microcebus murinus | ENSMICG00000003971 |
59463 | Myotis lucifugus | ENSMLUG00000029614 | 13616 | Monodelphis domestica | ENSMODG00000013187 |
9986 | Oryctolagus cuniculus | ENSOCUG00000001047 | 9978 | Ochotona princeps | ENSOPRG00000014427 |
7757 | Petromyzon marinus | ENSPMAG00000006011 | 9601 | Pongo abelii | ENSPPYG00000015091 |
9598 | Pan troglodytes | ENSPTRG00000016472 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000010683 |
99883 | Tetraodon nigroviridis | ENSTNIG00000017717 | 31033 | Takifugu rubripes | ENSTRUG00000014094 |
9739 | Tursiops truncatus | ENSTTRG00000006168 | 8364 | Xenopus tropicalis | ENSXETG00000001526 |