Basic Information | |||
Gene ID | 559803 | ||
Gene Name | smarca1; LOC559803, si:dkey-148b12.1 | ||
Full Name | Uncharacterized protein | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | A5WUY4 | UniGene | Dr.81160 |
PDB | NULL | OMIM | NULL |
KEGG | dre:559803 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 7955.ENSDARP00000023313 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSDARP00000023313 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 826 | 880 | 6.70e-30 | Homeodomain-like |
ENSDARP00000023313 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 914 | 1019 | 5.50e-47 | Homeodomain-like |
ENSDARP00000023313 | Pfam | PF00176 | IPR000330 | 146 | 425 | 3.10e-84 | SNF2-related |
ENSDARP00000023313 | Pfam | PF00271 | IPR001650 | 482 | 559 | 6.20e-16 | Helicase, C-terminal |
ENSDARP00000023313 | Pfam | PF09110 | IPR015194 | 728 | 826 | 2.80e-27 | ISWI HAND domain |
ENSDARP00000023313 | Pfam | PF09111 | IPR015195 | 883 | 997 | 3.50e-43 | SLIDE domain |
ENSDARP00000023313 | Pfam | PF13892 | IPR020838 | 44 | 73 | 3.40e-05 | DBINO domain |
ENSDARP00000023313 | ProSiteProfiles | PS51192 | IPR014001 | 155 | 320 | 0.00e-00 | Helicase, superfamily 1/2, ATP-binding domain |
ENSDARP00000023313 | ProSiteProfiles | PS51194 | IPR001650 | 449 | 600 | 0.00e-00 | Helicase, C-terminal |
ENSDARP00000023313 | ProSiteProfiles | PS51293 | IPR017884 | 825 | 877 | 0.00e-00 | SANT domain |
ENSDARP00000023313 | SMART | SM00487 | IPR014001 | 139 | 331 | 3.10e-45 | Helicase, superfamily 1/2, ATP-binding domain |
ENSDARP00000023313 | SMART | SM00490 | IPR001650 | 475 | 559 | 2.90e-29 | Helicase, C-terminal |
ENSDARP00000023313 | SMART | SM00717 | IPR001005 | 826 | 875 | 3.50e-08 | SANT/Myb domain |
ENSDARP00000023313 | SMART | SM00717 | IPR001005 | 928 | 992 | 1.80e-06 | SANT/Myb domain |
ENSDARP00000023313 | SUPERFAMILY | SSF101224 | IPR015194 | 729 | 828 | 0.00e-00 | ISWI HAND domain |
ENSDARP00000023313 | SUPERFAMILY | SSF46689 | IPR009057 | 829 | 879 | 0.00e-00 | Homeodomain-like |
ENSDARP00000023313 | SUPERFAMILY | SSF46689 | IPR009057 | 881 | 1005 | 0.00e-00 | Homeodomain-like |
ENSDARP00000023313 | SUPERFAMILY | SSF52540 | IPR027417 | 126 | 357 | 0.00e-00 | P-loop containing nucleoside triphosphate hydrolase |
ENSDARP00000023313 | SUPERFAMILY | SSF52540 | IPR027417 | 359 | 639 | 0.00e-00 | P-loop containing nucleoside triphosphate hydrolase |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSDARP00000023313 | PF00176 | 0 | SNF2_N | SNF2 family N-terminal domain |
ENSDARP00000023313 | PF09111 | 3.50325e-43 | SLIDE | SLIDE |
ENSDARP00000023313 | PF09110 | 2.8e-27 | HAND | HAND |
ENSDARP00000023313 | PF00271 | 1.5e-16 | Helicase_C | Helicase conserved C-terminal domain |
ENSDARP00000023313 | PF04851 | 1.9e-07 | ResIII | Type III restriction enzyme, res subunit |
ENSDARP00000023313 | PF11496 | 6.8e-07 | HDA2-3 | Class II histone deacetylase complex subunits 2 and 3 |
ENSDARP00000023313 | PF00270 | 8.2e-07 | DEAD | DEAD/DEAH box helicase |
ENSDARP00000023313 | PF13892 | 3.4e-05 | DBINO | DNA-binding domain |
ENSDARP00000023313 | PF00249 | 0.00029 | Myb_DNA-binding | Myb-like DNA-binding domain |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100062897 | 7425 | Nasonia vitripennis | 100117522 |
7029 | Acyrthosiphon pisum | 100162928 | 61853 | Nomascus leucogenys | 100601677 |
34638 | Metaseiulus occidentalis | 100901849 | 9597 | Pan paniscus | 100987223 |
9555 | Papio anubis | 101000396 | 39432 | Saimiri boliviensis | 101037818 |
8083 | Xiphophorus maculatus | 102218085 | 7897 | Latimeria chalumnae | 102345306 |
9606 | Homo sapiens | 1107 | 9823 | Sus scrofa | 100188905 |
6087 | Hydra magnipapillata | 100215182 | 28377 | Anolis carolinensis | 100558283 |
400682 | Amphimedon queenslandica | 100642088 | 30195 | Bombus terrestris | 100643266 |
132113 | Bombus impatiens | 100749786 | 7463 | Apis florea | 100871034 |
143995 | Megachile rotundata | 100879945 | 30611 | Otolemur garnettii | 100963648 |
13735 | Pelodiscus sinensis | 102460963 | 6239 | Caenorhabditis elegans | 175944 |
10116 | Rattus norvegicus | 317575 | 7227 | Drosophila melanogaster | 36390 |
9031 | Gallus gallus | 422457 | 9615 | Canis familiaris | 475451 |
10141 | Cavia porcellus | ENSCPOG00000013601 | 9371 | Echinops telfairi | ENSETEG00000017426 |
9103 | Meleagris gallopavo | ENSMGAG00000007042 | 9544 | Macaca mulatta | ENSMMUG00000008818 |
9669 | Mustela putorius furo | ENSMPUG00000017423 | 9258 | Ornithorhynchus anatinus | ENSOANG00000002862 |
9813 | Procavia capensis | ENSPCAG00000001998 | 132908 | Pteropus vampyrus | ENSPVAG00000006482 |
42254 | Sorex araneus | ENSSARG00000005501 | 9305 | Sarcophilus harrisii | ENSSHAG00000008464 |
37347 | Tupaia belangeri | ENSTBEG00000014973 | 59729 | Taeniopygia guttata | ENSTGUG00000003899 |
9478 | Tarsius syrichta | ENSTSYG00000009954 | 30538 | Vicugna pacos | ENSVPAG00000008982 |
7668 | Strongylocentrotus purpuratus | 583705 | 7070 | Tribolium castaneum | 660820 |
7719 | Ciona intestinalis | 778936 | 10090 | Mus musculus | 93761 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000015218 | 9913 | Bos taurus | ENSBTAG00000002292 |
9358 | Choloepus hoffmanni | ENSCHOG00000011724 | 9483 | Callithrix jacchus | ENSCJAG00000002868 |
51511 | Ciona savignyi | ENSCSAVG00000004620 | 9361 | Dasypus novemcinctus | ENSDNOG00000009158 |
10020 | Dipodomys ordii | ENSDORG00000003466 | 9365 | Erinaceus europaeus | ENSEEUG00000013176 |
9685 | Felis catus | ENSFCAG00000018496 | 69293 | Gasterosteus aculeatus | ENSGACG00000017238 |
9595 | Gorilla gorilla | ENSGGOG00000012595 | 8049 | Gadus morhua | ENSGMOG00000007519 |
9785 | Loxodonta africana | ENSLAFG00000000896 | 9315 | Macropus eugenii | ENSMEUG00000001267 |
30608 | Microcebus murinus | ENSMICG00000003971 | 59463 | Myotis lucifugus | ENSMLUG00000029614 |
13616 | Monodelphis domestica | ENSMODG00000013187 | 9986 | Oryctolagus cuniculus | ENSOCUG00000001047 |
9978 | Ochotona princeps | ENSOPRG00000014427 | 7757 | Petromyzon marinus | ENSPMAG00000006011 |
9601 | Pongo abelii | ENSPPYG00000015091 | 9598 | Pan troglodytes | ENSPTRG00000016472 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000010683 | 99883 | Tetraodon nigroviridis | ENSTNIG00000017717 |
31033 | Takifugu rubripes | ENSTRUG00000014094 | 9739 | Tursiops truncatus | ENSTTRG00000006168 |
8364 | Xenopus tropicalis | ENSXETG00000001526 |