Basic Information | |||
Gene ID | 454169 | ||
Gene Name | CTCF | ||
Full Name | CCCTC-binding factor (Zinc finger protein) | ||
Organism | Pan troglodytes [9598] |
Cross Reference | |||
UniProt | H2QBB9 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | ptr:454169 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSPTRP00000014062 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 264 | 295 | 5.40e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPTRP00000014062 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 296 | 323 | 2.00e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPTRP00000014062 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 324 | 352 | 5.10e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPTRP00000014062 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 353 | 379 | 1.90e-12 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPTRP00000014062 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 380 | 398 | 3.80e-11 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPTRP00000014062 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 399 | 432 | 8.90e-12 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPTRP00000014062 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 468 | 496 | 5.20e-08 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPTRP00000014062 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 497 | 515 | 5.30e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPTRP00000014062 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 516 | 543 | 2.40e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSPTRP00000014062 | Pfam | PF00096 | IPR007087 | 437 | 460 | 2.90e-02 | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSitePatterns | PS00028 | IPR007087 | 268 | 288 | - | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSitePatterns | PS00028 | IPR007087 | 296 | 316 | - | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSitePatterns | PS00028 | IPR007087 | 324 | 345 | - | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSitePatterns | PS00028 | IPR007087 | 409 | 430 | - | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSitePatterns | PS00028 | IPR007087 | 439 | 460 | - | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSitePatterns | PS00028 | IPR007087 | 469 | 489 | - | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSitePatterns | PS00028 | IPR007087 | 497 | 517 | - | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSitePatterns | PS00028 | IPR007087 | 525 | 546 | - | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSiteProfiles | PS50157 | IPR007087 | 266 | 293 | 0.00e-00 | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSiteProfiles | PS50157 | IPR007087 | 294 | 321 | 0.00e-00 | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSiteProfiles | PS50157 | IPR007087 | 322 | 350 | 0.00e-00 | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSiteProfiles | PS50157 | IPR007087 | 351 | 378 | 0.00e-00 | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSiteProfiles | PS50157 | IPR007087 | 379 | 406 | 0.00e-00 | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSiteProfiles | PS50157 | IPR007087 | 407 | 435 | 0.00e-00 | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSiteProfiles | PS50157 | IPR007087 | 437 | 465 | 0.00e-00 | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSiteProfiles | PS50157 | IPR007087 | 467 | 494 | 0.00e-00 | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSiteProfiles | PS50157 | IPR007087 | 495 | 522 | 0.00e-00 | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSiteProfiles | PS50157 | IPR007087 | 523 | 546 | 0.00e-00 | Zinc finger, C2H2 |
ENSPTRP00000014062 | ProSiteProfiles | PS50157 | IPR007087 | 555 | 573 | 0.00e-00 | Zinc finger, C2H2 |
ENSPTRP00000014062 | SMART | SM00355 | IPR015880 | 266 | 288 | 4.10e-07 | Zinc finger, C2H2-like |
ENSPTRP00000014062 | SMART | SM00355 | IPR015880 | 294 | 316 | 2.40e-05 | Zinc finger, C2H2-like |
ENSPTRP00000014062 | SMART | SM00355 | IPR015880 | 322 | 345 | 2.30e-06 | Zinc finger, C2H2-like |
ENSPTRP00000014062 | SMART | SM00355 | IPR015880 | 351 | 373 | 1.70e-05 | Zinc finger, C2H2-like |
ENSPTRP00000014062 | SMART | SM00355 | IPR015880 | 379 | 401 | 6.80e-06 | Zinc finger, C2H2-like |
ENSPTRP00000014062 | SMART | SM00355 | IPR015880 | 407 | 430 | 6.70e-04 | Zinc finger, C2H2-like |
ENSPTRP00000014062 | SMART | SM00355 | IPR015880 | 437 | 460 | 3.20e-04 | Zinc finger, C2H2-like |
ENSPTRP00000014062 | SMART | SM00355 | IPR015880 | 467 | 489 | 2.60e-04 | Zinc finger, C2H2-like |
ENSPTRP00000014062 | SMART | SM00355 | IPR015880 | 495 | 517 | 1.20e-04 | Zinc finger, C2H2-like |
ENSPTRP00000014062 | SMART | SM00355 | IPR015880 | 523 | 546 | 8.20e-05 | Zinc finger, C2H2-like |
ENSPTRP00000014062 | SMART | SM00355 | IPR015880 | 555 | 575 | 4.10e-02 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSPTRP00000014062 | PF13465 | 0 | zf-H2C2_2 | Zinc-finger double domain |
ENSPTRP00000014062 | PF00096 | 3.1e-31 | zf-C2H2 | Zinc finger, C2H2 type |
ENSPTRP00000014062 | PF13894 | 1.7e-24 | zf-C2H2_4 | C2H2-type zinc finger |
ENSPTRP00000014062 | PF12171 | 1.8e-08 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
ENSPTRP00000014062 | PF13909 | 2.2e-05 | zf-H2C2_5 | C2H2-type zinc-finger domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSPTRP00000014062 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSPTRP00000014062 | GO:0005634 | cellular_component | nucleus |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
132113 | Bombus impatiens | 100745727 | 10029 | Cricetulus griseus | 100763233 |
143995 | Megachile rotundata | 100875911 | 34638 | Metaseiulus occidentalis | 100905908 |
9597 | Pan paniscus | 100982711 | 9555 | Papio anubis | 101018078 |
39432 | Saimiri boliviensis | 101030662 | 9685 | Felis catus | 101101354 |
9669 | Mustela putorius furo | 101681874 | 7897 | Latimeria chalumnae | 102366596 |
7955 | Danio rerio | 415104 | 7425 | Nasonia vitripennis | 100122469 |
9913 | Bos taurus | 100144618 | 7029 | Acyrthosiphon pisum | 100159049 |
28377 | Anolis carolinensis | 100567348 | 30195 | Bombus terrestris | 100652194 |
8128 | Oreochromis niloticus | 100707703 | 7463 | Apis florea | 100868688 |
9305 | Sarcophilus harrisii | 100934486 | 59463 | Myotis lucifugus | 102442491 |
13735 | Pelodiscus sinensis | 102450368 | 7227 | Drosophila melanogaster | 38817 |
7668 | Strongylocentrotus purpuratus | 593001 | 7070 | Tribolium castaneum | 662791 |
9483 | Callithrix jacchus | ENSCJAG00000016139 | 10141 | Cavia porcellus | ENSCPOG00000010698 |
9361 | Dasypus novemcinctus | ENSDNOG00000015712 | 9595 | Gorilla gorilla | ENSGGOG00000001063 |
9315 | Macropus eugenii | ENSMEUG00000005728 | 13616 | Monodelphis domestica | ENSMODG00000016490 |
61853 | Nomascus leucogenys | ENSNLEG00000004747 | 9258 | Ornithorhynchus anatinus | ENSOANG00000004762 |
9986 | Oryctolagus cuniculus | ENSOCUG00000008983 | 9978 | Ochotona princeps | ENSOPRG00000013470 |
8090 | Oryzias latipes | ENSORLG00000018357 | 9813 | Procavia capensis | ENSPCAG00000009389 |
7757 | Petromyzon marinus | ENSPMAG00000004257 | 9823 | Sus scrofa | ENSSSCG00000021678 |
59729 | Taeniopygia guttata | ENSTGUG00000005603 | 9739 | Tursiops truncatus | ENSTTRG00000009184 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000017438 | 9615 | Canis familiaris | ENSCAFG00000020355 |
9358 | Choloepus hoffmanni | ENSCHOG00000011227 | 7719 | Ciona intestinalis | ENSCING00000006765 |
10020 | Dipodomys ordii | ENSDORG00000000111 | 9796 | Equus caballus | ENSECAG00000015924 |
9365 | Erinaceus europaeus | ENSEEUG00000014807 | 9371 | Echinops telfairi | ENSETEG00000017697 |
69293 | Gasterosteus aculeatus | ENSGACG00000015865 | 9031 | Gallus gallus | ENSGALG00000001817 |
8049 | Gadus morhua | ENSGMOG00000006386 | 9785 | Loxodonta africana | ENSLAFG00000007101 |
9103 | Meleagris gallopavo | ENSMGAG00000002200 | 30608 | Microcebus murinus | ENSMICG00000012128 |
9544 | Macaca mulatta | ENSMMUG00000009798 | 30611 | Otolemur garnettii | ENSOGAG00000011901 |
132908 | Pteropus vampyrus | ENSPVAG00000016588 | 42254 | Sorex araneus | ENSSARG00000006220 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000024951 | 37347 | Tupaia belangeri | ENSTBEG00000008701 |
99883 | Tetraodon nigroviridis | ENSTNIG00000009314 | 31033 | Takifugu rubripes | ENSTRUG00000017943 |
9478 | Tarsius syrichta | ENSTSYG00000007670 | 30538 | Vicugna pacos | ENSVPAG00000004409 |
8083 | Xiphophorus maculatus | ENSXMAG00000016342 |