
Basic Information | |||
| Gene ID | 83574 ; Check Expression Profles ; Check TFs & Targets Binding | ||
| Gene Name | Rxrg; Nr2b3 | ||
| Full Name | Retinoic acid receptor RXR-gamma | ||
| Organism | Rattus norvegicus [10116] | ||
Cross Reference | |||
| UniProt | Q5BJR8 | UniGene | Rn.40816 |
| PDB | NULL | OMIM | NULL |
| KEGG | rno:83574 | UCSC | RGD:620046 |
Protein Interactions | |
| DIP | NULL |
| IntAct | NULL |
| MINT | NULL |
| STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
| Protein | Program | Term | IPRS | Start | End | Score | Description |
| ENSRNOP00000006117 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 233 | 459 | 1.00e-102 | Nuclear hormone receptor, ligand-binding |
| ENSRNOP00000006117 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 135 | 217 | 1.40e-33 | Zinc finger, NHR/GATA-type |
| ENSRNOP00000006117 | Pfam | PF00104 | IPR000536 | 263 | 443 | 3.70e-40 | Nuclear hormone receptor, ligand-binding, core |
| ENSRNOP00000006117 | Pfam | PF00105 | IPR001628 | 138 | 206 | 1.90e-31 | Zinc finger, nuclear hormone receptor-type |
| ENSRNOP00000006117 | Pfam | PF11825 | IPR021780 | 24 | 134 | 9.80e-32 | Nuclear/hormone receptor activator site AF-1 |
| ENSRNOP00000006117 | PRINTS | PR00047 | IPR001628 | 139 | 155 | 1.40e-18 | Zinc finger, nuclear hormone receptor-type |
| ENSRNOP00000006117 | PRINTS | PR00047 | IPR001628 | 155 | 170 | 1.40e-18 | Zinc finger, nuclear hormone receptor-type |
| ENSRNOP00000006117 | PRINTS | PR00047 | IPR001628 | 188 | 196 | 1.40e-18 | Zinc finger, nuclear hormone receptor-type |
| ENSRNOP00000006117 | PRINTS | PR00047 | IPR001628 | 196 | 204 | 1.40e-18 | Zinc finger, nuclear hormone receptor-type |
| ENSRNOP00000006117 | PRINTS | PR00398 | IPR001723 | 200 | 210 | 9.10e-35 | Steroid hormone receptor |
| ENSRNOP00000006117 | PRINTS | PR00398 | IPR001723 | 272 | 293 | 9.10e-35 | Steroid hormone receptor |
| ENSRNOP00000006117 | PRINTS | PR00398 | IPR001723 | 293 | 309 | 9.10e-35 | Steroid hormone receptor |
| ENSRNOP00000006117 | PRINTS | PR00398 | IPR001723 | 361 | 376 | 9.10e-35 | Steroid hormone receptor |
| ENSRNOP00000006117 | PRINTS | PR00398 | IPR001723 | 418 | 435 | 9.10e-35 | Steroid hormone receptor |
| ENSRNOP00000006117 | PRINTS | PR00545 | IPR000003 | 207 | 220 | 1.90e-39 | Retinoid X receptor/HNF4 |
| ENSRNOP00000006117 | PRINTS | PR00545 | IPR000003 | 323 | 348 | 1.90e-39 | Retinoid X receptor/HNF4 |
| ENSRNOP00000006117 | PRINTS | PR00545 | IPR000003 | 349 | 367 | 1.90e-39 | Retinoid X receptor/HNF4 |
| ENSRNOP00000006117 | PRINTS | PR00545 | IPR000003 | 390 | 409 | 1.90e-39 | Retinoid X receptor/HNF4 |
| ENSRNOP00000006117 | ProSitePatterns | PS00031 | IPR001628 | 139 | 165 | - | Zinc finger, nuclear hormone receptor-type |
| ENSRNOP00000006117 | ProSiteProfiles | PS51030 | IPR001628 | 136 | 211 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
| ENSRNOP00000006117 | SMART | SM00399 | IPR001628 | 136 | 207 | 2.30e-41 | Zinc finger, nuclear hormone receptor-type |
| ENSRNOP00000006117 | SMART | SM00430 | IPR000536 | 271 | 430 | 2.90e-52 | Nuclear hormone receptor, ligand-binding, core |
| ENSRNOP00000006117 | SUPERFAMILY | SSF48508 | IPR008946 | 189 | 457 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
| Protein | Pfam ID | E.value | Name | Description |
| ENSRNOP00000006117 | PF00104 | 2.6e-40 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
| ENSRNOP00000006117 | PF11825 | 4.5e-32 | Nuc_recep-AF1 | Nuclear/hormone receptor activator site AF-1 |
| ENSRNOP00000006117 | PF00105 | 1.1e-31 | zf-C4 | Zinc finger, C4 type (two domains) |
Gene Ontology Annotation | |||
| Protein | Entry | Name Space | Description |
| ENSRNOP00000006117 | GO:0005634 | cellular_component | nucleus |
| ENSRNOP00000006117 | GO:0003707 | molecular_function | steroid hormone receptor activity |
| ENSRNOP00000006117 | GO:0008270 | molecular_function | zinc ion binding |
| ENSRNOP00000006117 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
| TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
| 7029 | Acyrthosiphon pisum | 100164958 | 9483 | Callithrix jacchus | 100386851 |
| 61853 | Nomascus leucogenys | 100592610 | 30195 | Bombus terrestris | 100651492 |
| 143995 | Megachile rotundata | 100877684 | 34638 | Metaseiulus occidentalis | 100897482 |
| 9685 | Felis catus | 101081273 | 9595 | Gorilla gorilla | 101152695 |
| 43179 | Ictidomys tridecemlineatus | 101957499 | 8083 | Xiphophorus maculatus | 102222228 |
| 10090 | Mus musculus | 20181 | 7460 | Apis mellifera | 409227 |
| 7955 | Danio rerio | 436617 | 9615 | Canis familiaris | 478989 |
| 9606 | Homo sapiens | 6258 | 9544 | Macaca mulatta | 694807 |
| 9258 | Ornithorhynchus anatinus | 100074625 | 7425 | Nasonia vitripennis | 100118473 |
| 10224 | Saccoglossus kowalevskii | 100329058 | 132113 | Bombus impatiens | 100749223 |
| 7463 | Apis florea | 100871050 | 9597 | Pan paniscus | 100992346 |
| 9555 | Papio anubis | 101015058 | 39432 | Saimiri boliviensis | 101040247 |
| 9669 | Mustela putorius furo | 101693923 | 13735 | Pelodiscus sinensis | 102447903 |
| 7227 | Drosophila melanogaster | 31165 | 9823 | Sus scrofa | 445465 |
| 9598 | Pan troglodytes | 457476 | 7668 | Strongylocentrotus purpuratus | 579018 |
| 7070 | Tribolium castaneum | 661207 | 8364 | Xenopus tropicalis | 779621 |
| 9913 | Bos taurus | ENSBTAG00000017851 | 10141 | Cavia porcellus | ENSCPOG00000000168 |
| 51511 | Ciona savignyi | ENSCSAVG00000007831 | 69293 | Gasterosteus aculeatus | ENSGACG00000011685 |
| 8128 | Oreochromis niloticus | ENSONIG00000002143 | 9978 | Ochotona princeps | ENSOPRG00000014490 |
| 7757 | Petromyzon marinus | ENSPMAG00000007822 | 132908 | Pteropus vampyrus | ENSPVAG00000007457 |
| 9305 | Sarcophilus harrisii | ENSSHAG00000015367 | 59729 | Taeniopygia guttata | ENSTGUG00000005800 |
| 99883 | Tetraodon nigroviridis | ENSTNIG00000018446 | 30538 | Vicugna pacos | ENSVPAG00000004578 |
| 28377 | Anolis carolinensis | ENSACAG00000007923 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000006616 |
| 9358 | Choloepus hoffmanni | ENSCHOG00000009952 | 10020 | Dipodomys ordii | ENSDORG00000014034 |
| 9796 | Equus caballus | ENSECAG00000024377 | 9365 | Erinaceus europaeus | ENSEEUG00000015558 |
| 9371 | Echinops telfairi | ENSETEG00000004886 | 9031 | Gallus gallus | ENSGALG00000003406 |
| 8049 | Gadus morhua | ENSGMOG00000018023 | 7897 | Latimeria chalumnae | ENSLACG00000006999 |
| 9785 | Loxodonta africana | ENSLAFG00000008059 | 9315 | Macropus eugenii | ENSMEUG00000013948 |
| 9103 | Meleagris gallopavo | ENSMGAG00000003715 | 30608 | Microcebus murinus | ENSMICG00000009970 |
| 59463 | Myotis lucifugus | ENSMLUG00000010476 | 13616 | Monodelphis domestica | ENSMODG00000001291 |
| 9986 | Oryctolagus cuniculus | ENSOCUG00000005512 | 30611 | Otolemur garnettii | ENSOGAG00000011318 |
| 8090 | Oryzias latipes | ENSORLG00000016690 | 9813 | Procavia capensis | ENSPCAG00000008619 |
| 9601 | Pongo abelii | ENSPPYG00000000571 | 37347 | Tupaia belangeri | ENSTBEG00000002797 |
| 31033 | Takifugu rubripes | ENSTRUG00000006878 | 9478 | Tarsius syrichta | ENSTSYG00000002120 |
| 9739 | Tursiops truncatus | ENSTTRG00000003653 | |||
Paralogs | |||
| ENSRNOG00000000464 | |||