Basic Information
Gene ID ENSPMAG00000003606
Gene Name PRDM1 (2 of 3)
Full Name Uncharacterized protein
Organism Petromyzon marinus [7757]

Cross Reference
UniProt S4RFD9 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSPMAP00000003921 Gene3D G3DSA:3.30.160.60 IPR013087 119 146 1.70e-05 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPMAP00000003921 Gene3D G3DSA:3.30.160.60 IPR013087 15 44 1.50e-16 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPMAP00000003921 Gene3D G3DSA:3.30.160.60 IPR013087 45 64 2.20e-15 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPMAP00000003921 Gene3D G3DSA:3.30.160.60 IPR013087 65 90 6.30e-16 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPMAP00000003921 Gene3D G3DSA:3.30.160.60 IPR013087 91 118 3.90e-11 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPMAP00000003921 ProSitePatterns PS00028 IPR007087 101 121 - Zinc finger, C2H2
ENSPMAP00000003921 ProSitePatterns PS00028 IPR007087 17 37 - Zinc finger, C2H2
ENSPMAP00000003921 ProSitePatterns PS00028 IPR007087 45 65 - Zinc finger, C2H2
ENSPMAP00000003921 ProSitePatterns PS00028 IPR007087 73 93 - Zinc finger, C2H2
ENSPMAP00000003921 ProSiteProfiles PS50157 IPR007087 15 42 0.00e-00 Zinc finger, C2H2
ENSPMAP00000003921 ProSiteProfiles PS50157 IPR007087 43 70 0.00e-00 Zinc finger, C2H2
ENSPMAP00000003921 ProSiteProfiles PS50157 IPR007087 71 98 0.00e-00 Zinc finger, C2H2
ENSPMAP00000003921 ProSiteProfiles PS50157 IPR007087 99 126 0.00e-00 Zinc finger, C2H2
ENSPMAP00000003921 SMART SM00355 IPR015880 127 147 3.90e-01 Zinc finger, C2H2-like
ENSPMAP00000003921 SMART SM00355 IPR015880 15 37 2.40e-07 Zinc finger, C2H2-like
ENSPMAP00000003921 SMART SM00355 IPR015880 43 65 3.90e-05 Zinc finger, C2H2-like
ENSPMAP00000003921 SMART SM00355 IPR015880 71 93 2.20e-05 Zinc finger, C2H2-like
ENSPMAP00000003921 SMART SM00355 IPR015880 99 121 1.50e-04 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSPMAP00000003921 PF13465 3.7e-31 zf-H2C2_2 Zinc-finger double domain
ENSPMAP00000003921 PF00096 5.3e-20 zf-C2H2 Zinc finger, C2H2 type
ENSPMAP00000003921 PF13894 2.5e-13 zf-C2H2_4 C2H2-type zinc finger
ENSPMAP00000003921 PF12874 1.5e-08 zf-met Zinc-finger of C2H2 type
ENSPMAP00000003921 PF12171 2.3e-07 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding
ENSPMAP00000003921 PF13912 0.0003 zf-C2H2_6 C2H2-type zinc finger

Gene Ontology Annotation
Protein Entry Name Space Description
ENSPMAP00000003921 GO:0006351 biological_process transcription, DNA-templated
ENSPMAP00000003921 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSPMAP00000003921 GO:0005634 cellular_component nucleus
ENSPMAP00000003921 GO:0003677 molecular_function DNA binding
ENSPMAP00000003921 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSPMAP00000003921 GO:0046872 molecular_function metal ion binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7070 Tribolium castaneum 100142159 7029 Acyrthosiphon pisum 100159482
8128 Oreochromis niloticus 100706221 143995 Megachile rotundata 100877382
34638 Metaseiulus occidentalis 100906146 30611 Otolemur garnettii 100943698
9669 Mustela putorius furo 101675818 7227 Drosophila melanogaster 38638
7460 Apis mellifera 408295 9615 Canis familiaris 481947
7668 Strongylocentrotus purpuratus 751833 9913 Bos taurus ENSBTAG00000009631
9358 Choloepus hoffmanni ENSCHOG00000011220 9483 Callithrix jacchus ENSCJAG00000009793
51511 Ciona savignyi ENSCSAVG00000011146 9685 Felis catus ENSFCAG00000010755
69293 Gasterosteus aculeatus ENSGACG00000001740 8049 Gadus morhua ENSGMOG00000009730
9103 Meleagris gallopavo ENSMGAG00000013524 9544 Macaca mulatta ENSMMUG00000003420
8090 Oryzias latipes ENSORLG00000015684 7425 Nasonia vitripennis 100123469
9601 Pongo abelii 100452654 30195 Bombus terrestris 100650488
132113 Bombus impatiens 100741638 13735 Pelodiscus sinensis 102454613
7955 Danio rerio 323473 9031 Gallus gallus 445340
28377 Anolis carolinensis ENSACAG00000005496 9646 Ailuropoda melanoleuca ENSAMEG00000001482
10020 Dipodomys ordii ENSDORG00000014237 9365 Erinaceus europaeus ENSEEUG00000013222
9371 Echinops telfairi ENSETEG00000019669 9315 Macropus eugenii ENSMEUG00000000043
30608 Microcebus murinus ENSMICG00000010329 9258 Ornithorhynchus anatinus ENSOANG00000004176
9986 Oryctolagus cuniculus ENSOCUG00000016978 9978 Ochotona princeps ENSOPRG00000006055
9813 Procavia capensis ENSPCAG00000010624 132908 Pteropus vampyrus ENSPVAG00000011732
42254 Sorex araneus ENSSARG00000004079 99883 Tetraodon nigroviridis ENSTNIG00000003926
30538 Vicugna pacos ENSVPAG00000011363 8364 Xenopus tropicalis ENSXETG00000008674
8083 Xiphophorus maculatus ENSXMAG00000013351 9598 Pan troglodytes ENSPTRG00000000383
59729 Taeniopygia guttata ENSTGUG00000012204 31033 Takifugu rubripes ENSTRUG00000000404