Basic Information
Gene ID ENSTRUG00000000404
Gene Name prdm1
Full Name Uncharacterized protein
Organism Takifugu rubripes [31033]

Cross Reference
UniProt H2RLD4 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSTRUP00000000947 Gene3D G3DSA:3.30.160.60 IPR013087 550 579 1.10e-14 Zinc finger C2H2-type/integrase DNA-binding domain
ENSTRUP00000000947 Gene3D G3DSA:3.30.160.60 IPR013087 580 599 5.70e-13 Zinc finger C2H2-type/integrase DNA-binding domain
ENSTRUP00000000947 Gene3D G3DSA:3.30.160.60 IPR013087 600 625 3.80e-16 Zinc finger C2H2-type/integrase DNA-binding domain
ENSTRUP00000000947 Gene3D G3DSA:3.30.160.60 IPR013087 626 657 6.10e-09 Zinc finger C2H2-type/integrase DNA-binding domain
ENSTRUP00000000947 Pfam PF00856 IPR001214 104 204 1.30e-07 SET domain
ENSTRUP00000000947 PIRSF PIRSF013212 IPR016608 1 807 0.00e-00 PR-domain zinc finger protein PRDM1
ENSTRUP00000000947 ProSitePatterns PS00028 IPR007087 552 572 - Zinc finger, C2H2
ENSTRUP00000000947 ProSitePatterns PS00028 IPR007087 580 600 - Zinc finger, C2H2
ENSTRUP00000000947 ProSitePatterns PS00028 IPR007087 608 628 - Zinc finger, C2H2
ENSTRUP00000000947 ProSitePatterns PS00028 IPR007087 636 656 - Zinc finger, C2H2
ENSTRUP00000000947 ProSiteProfiles PS50157 IPR007087 550 577 0.00e-00 Zinc finger, C2H2
ENSTRUP00000000947 ProSiteProfiles PS50157 IPR007087 578 605 0.00e-00 Zinc finger, C2H2
ENSTRUP00000000947 ProSiteProfiles PS50157 IPR007087 606 633 0.00e-00 Zinc finger, C2H2
ENSTRUP00000000947 ProSiteProfiles PS50157 IPR007087 634 661 0.00e-00 Zinc finger, C2H2
ENSTRUP00000000947 ProSiteProfiles PS50280 IPR001214 89 205 0.00e-00 SET domain
ENSTRUP00000000947 SMART SM00317 IPR001214 91 211 2.80e-18 SET domain
ENSTRUP00000000947 SMART SM00355 IPR015880 550 572 7.60e-07 Zinc finger, C2H2-like
ENSTRUP00000000947 SMART SM00355 IPR015880 578 600 1.30e-05 Zinc finger, C2H2-like
ENSTRUP00000000947 SMART SM00355 IPR015880 606 628 2.50e-05 Zinc finger, C2H2-like
ENSTRUP00000000947 SMART SM00355 IPR015880 634 656 4.50e-04 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSTRUP00000000947 PF13465 3.9e-24 zf-H2C2_2 Zinc-finger double domain
ENSTRUP00000000947 PF00096 3.4e-12 zf-C2H2 Zinc finger, C2H2 type
ENSTRUP00000000947 PF13894 8.4e-11 zf-C2H2_4 C2H2-type zinc finger
ENSTRUP00000000947 PF00856 3.1e-08 SET SET domain
ENSTRUP00000000947 PF13912 2e-05 zf-C2H2_6 C2H2-type zinc finger

Gene Ontology Annotation
Protein Entry Name Space Description
ENSTRUP00000000947 GO:0006351 biological_process transcription, DNA-templated
ENSTRUP00000000947 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSTRUP00000000947 GO:0005634 cellular_component nucleus
ENSTRUP00000000947 GO:0003677 molecular_function DNA binding
ENSTRUP00000000947 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSTRUP00000000947 GO:0046872 molecular_function metal ion binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7070 Tribolium castaneum 100142159 9823 Sus scrofa 100154284
7029 Acyrthosiphon pisum 100159482 61853 Nomascus leucogenys 100585120
143995 Megachile rotundata 100877382 30611 Otolemur garnettii 100943698
39432 Saimiri boliviensis 101033194 43179 Ictidomys tridecemlineatus 101977297
7227 Drosophila melanogaster 38638 7460 Apis mellifera 408295
9615 Canis familiaris 481947 7668 Strongylocentrotus purpuratus 751833
9358 Choloepus hoffmanni ENSCHOG00000011220 10141 Cavia porcellus ENSCPOG00000014064
51511 Ciona savignyi ENSCSAVG00000011146 69293 Gasterosteus aculeatus ENSGACG00000001740
9103 Meleagris gallopavo ENSMGAG00000013524 8090 Oryzias latipes ENSORLG00000015684
9796 Equus caballus 100071967 7425 Nasonia vitripennis 100123469
30195 Bombus terrestris 100650488 8128 Oreochromis niloticus 100706221
132113 Bombus impatiens 100741638 10029 Cricetulus griseus 100759446
34638 Metaseiulus occidentalis 100906146 9597 Pan paniscus 100979416
9555 Papio anubis 101009742 9595 Gorilla gorilla 101142019
9669 Mustela putorius furo 101675818 13735 Pelodiscus sinensis 102454613
10090 Mus musculus 12142 10116 Rattus norvegicus 309871
7955 Danio rerio 323473 9031 Gallus gallus 445340
9606 Homo sapiens 639 28377 Anolis carolinensis ENSACAG00000005496
9646 Ailuropoda melanoleuca ENSAMEG00000001482 10020 Dipodomys ordii ENSDORG00000014237
9365 Erinaceus europaeus ENSEEUG00000013222 9371 Echinops telfairi ENSETEG00000019669
9685 Felis catus ENSFCAG00000010755 8049 Gadus morhua ENSGMOG00000009730
9785 Loxodonta africana ENSLAFG00000013436 9315 Macropus eugenii ENSMEUG00000000043
30608 Microcebus murinus ENSMICG00000010329 59463 Myotis lucifugus ENSMLUG00000014085
9258 Ornithorhynchus anatinus ENSOANG00000004176 9978 Ochotona princeps ENSOPRG00000006055
9813 Procavia capensis ENSPCAG00000009179 7757 Petromyzon marinus ENSPMAG00000003606
132908 Pteropus vampyrus ENSPVAG00000011732 42254 Sorex araneus ENSSARG00000004079
37347 Tupaia belangeri ENSTBEG00000004089 59729 Taeniopygia guttata ENSTGUG00000012204
99883 Tetraodon nigroviridis ENSTNIG00000003926 9478 Tarsius syrichta ENSTSYG00000011666
30538 Vicugna pacos ENSVPAG00000011363 8364 Xenopus tropicalis ENSXETG00000008674
8083 Xiphophorus maculatus ENSXMAG00000013351 9739 Tursiops truncatus ENSTTRG00000012894