Basic Information | |||
Gene ID | ENSRNOG00000033134 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Mef2c | ||
Full Name | Protein Mef2c | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | F1LZC6 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000046667 | Pfam | PF00319 | IPR002100 | 10 | 59 | 4.00e-22 | Transcription factor, MADS-box |
ENSRNOP00000046667 | Pfam | PF12347 | IPR022102 | 95 | 155 | 9.50e-13 | Holliday junction regulator protein family C-terminal |
ENSRNOP00000046667 | PRINTS | PR00404 | IPR002100 | 23 | 38 | 1.20e-25 | Transcription factor, MADS-box |
ENSRNOP00000046667 | PRINTS | PR00404 | IPR002100 | 3 | 23 | 1.20e-25 | Transcription factor, MADS-box |
ENSRNOP00000046667 | PRINTS | PR00404 | IPR002100 | 38 | 59 | 1.20e-25 | Transcription factor, MADS-box |
ENSRNOP00000046667 | ProSitePatterns | PS00350 | IPR002100 | 3 | 57 | - | Transcription factor, MADS-box |
ENSRNOP00000046667 | ProSiteProfiles | PS50066 | IPR002100 | 1 | 61 | 0.00e-00 | Transcription factor, MADS-box |
ENSRNOP00000046667 | SMART | SM00432 | IPR002100 | 1 | 60 | 8.50e-40 | Transcription factor, MADS-box |
ENSRNOP00000046667 | SUPERFAMILY | SSF55455 | IPR002100 | 2 | 89 | 0.00e-00 | Transcription factor, MADS-box |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000046667 | PF00319 | 2.3e-22 | SRF-TF | SRF-type transcription factor (DNA-binding and dimerisation domain) |
ENSRNOP00000046667 | PF12347 | 3.3e-13 | HJURP_C | Holliday junction regulator protein family C-terminal repeat |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000046667 | GO:0000122 | biological_process | negative regulation of transcription from RNA polymerase II promoter |
ENSRNOP00000046667 | GO:0000165 | biological_process | MAPK cascade |
ENSRNOP00000046667 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSRNOP00000046667 | GO:0006366 | biological_process | transcription from RNA polymerase II promoter |
ENSRNOP00000046667 | GO:0006915 | biological_process | apoptotic process |
ENSRNOP00000046667 | GO:0007507 | biological_process | heart development |
ENSRNOP00000046667 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
ENSRNOP00000046667 | GO:0071277 | biological_process | cellular response to calcium ion |
ENSRNOP00000046667 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000046667 | GO:0005737 | cellular_component | cytoplasm |
ENSRNOP00000046667 | GO:0000977 | molecular_function | RNA polymerase II regulatory region sequence-specific DNA binding |
ENSRNOP00000046667 | GO:0000981 | molecular_function | sequence-specific DNA binding RNA polymerase II transcription factor activity |
ENSRNOP00000046667 | GO:0001077 | molecular_function | RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription |
ENSRNOP00000046667 | GO:0003677 | molecular_function | DNA binding |
ENSRNOP00000046667 | GO:0003682 | molecular_function | chromatin binding |
ENSRNOP00000046667 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSRNOP00000046667 | GO:0046983 | molecular_function | protein dimerization activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10224 | Saccoglossus kowalevskii | 100313657 | 9358 | Choloepus hoffmanni | ENSCHOG00000010767 |
7425 | Nasonia vitripennis | 100122265 | 6087 | Hydra magnipapillata | 100204453 |
9646 | Ailuropoda melanoleuca | 100464632 | 7029 | Acyrthosiphon pisum | 100572713 |
30195 | Bombus terrestris | 100649884 | 10141 | Cavia porcellus | 100725079 |
132113 | Bombus impatiens | 100745731 | 10029 | Cricetulus griseus | 100754401 |
7463 | Apis florea | 100871942 | 143995 | Megachile rotundata | 100877544 |
34638 | Metaseiulus occidentalis | 100902919 | 9597 | Pan paniscus | 100975251 |
9555 | Papio anubis | 101019513 | 39432 | Saimiri boliviensis | 101029713 |
31033 | Takifugu rubripes | 101069405 | 9595 | Gorilla gorilla | 101139415 |
9669 | Mustela putorius furo | 101686957 | 7897 | Latimeria chalumnae | 102361694 |
10090 | Mus musculus | 17258 | 6239 | Caenorhabditis elegans | 172732 |
7227 | Drosophila melanogaster | 36032 | 7460 | Apis mellifera | 413946 |
9606 | Homo sapiens | 4205 | 9598 | Pan troglodytes | 461760 |
9615 | Canis familiaris | 479155 | 7668 | Strongylocentrotus purpuratus | 591326 |
7070 | Tribolium castaneum | 660448 | 28377 | Anolis carolinensis | ENSACAG00000000488 |
9913 | Bos taurus | ENSBTAG00000020701 | 7719 | Ciona intestinalis | ENSCING00000000628 |
9483 | Callithrix jacchus | ENSCJAG00000005848 | 51511 | Ciona savignyi | ENSCSAVG00000003571 |
7955 | Danio rerio | ENSDARG00000057527 | 9361 | Dasypus novemcinctus | ENSDNOG00000018848 |
10020 | Dipodomys ordii | ENSDORG00000010183 | 9796 | Equus caballus | ENSECAG00000024716 |
9365 | Erinaceus europaeus | ENSEEUG00000002968 | 9371 | Echinops telfairi | ENSETEG00000015637 |
9685 | Felis catus | ENSFCAG00000011595 | 69293 | Gasterosteus aculeatus | ENSGACG00000010270 |
9031 | Gallus gallus | ENSGALG00000014645 | 8049 | Gadus morhua | ENSGMOG00000000565 |
9785 | Loxodonta africana | ENSLAFG00000013761 | 9315 | Macropus eugenii | ENSMEUG00000012604 |
9103 | Meleagris gallopavo | ENSMGAG00000009283 | 30608 | Microcebus murinus | ENSMICG00000005703 |
59463 | Myotis lucifugus | ENSMLUG00000008230 | 9544 | Macaca mulatta | ENSMMUG00000019836 |
13616 | Monodelphis domestica | ENSMODG00000020223 | 61853 | Nomascus leucogenys | ENSNLEG00000012609 |
9258 | Ornithorhynchus anatinus | ENSOANG00000011076 | 9986 | Oryctolagus cuniculus | ENSOCUG00000010966 |
30611 | Otolemur garnettii | ENSOGAG00000028682 | 8128 | Oreochromis niloticus | ENSONIG00000015941 |
9978 | Ochotona princeps | ENSOPRG00000012052 | 8090 | Oryzias latipes | ENSORLG00000010062 |
9813 | Procavia capensis | ENSPCAG00000012944 | 9601 | Pongo abelii | ENSPPYG00000015621 |
13735 | Pelodiscus sinensis | ENSPSIG00000012244 | 132908 | Pteropus vampyrus | ENSPVAG00000009412 |
42254 | Sorex araneus | ENSSARG00000012570 | 9305 | Sarcophilus harrisii | ENSSHAG00000010347 |
9823 | Sus scrofa | ENSSSCG00000014149 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000001883 |
37347 | Tupaia belangeri | ENSTBEG00000006794 | 59729 | Taeniopygia guttata | ENSTGUG00000000676 |
99883 | Tetraodon nigroviridis | ENSTNIG00000015441 | 9478 | Tarsius syrichta | ENSTSYG00000003647 |
9739 | Tursiops truncatus | ENSTTRG00000003944 | 30538 | Vicugna pacos | ENSVPAG00000009789 |
8364 | Xenopus tropicalis | ENSXETG00000018788 | 8083 | Xiphophorus maculatus | ENSXMAG00000019414 |