Basic Information
Gene ID ENSSSCG00000006329
Gene Name LMX1A
Full Name Uncharacterized protein
Organism Sus scrofa [9823]

Cross Reference
UniProt F1S229 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSSSCP00000020221 Gene3D G3DSA:1.10.10.60 IPR009057 93 160 1.00e-23 Homeodomain-like
ENSSSCP00000020221 Gene3D G3DSA:2.10.110.10 IPR001781 6 63 2.50e-15 Zinc finger, LIM-type
ENSSSCP00000020221 Pfam PF00046 IPR001356 109 165 1.00e-17 Homeobox domain
ENSSSCP00000020221 Pfam PF00412 IPR001781 7 64 8.80e-16 Zinc finger, LIM-type
ENSSSCP00000020221 ProSitePatterns PS00027 IPR017970 141 164 - Homeobox, conserved site
ENSSSCP00000020221 ProSitePatterns PS00478 IPR001781 7 42 - Zinc finger, LIM-type
ENSSSCP00000020221 ProSiteProfiles PS50023 IPR001781 5 67 0.00e-00 Zinc finger, LIM-type
ENSSSCP00000020221 ProSiteProfiles PS50071 IPR001356 106 166 0.00e-00 Homeobox domain
ENSSSCP00000020221 SMART SM00132 IPR001781 6 60 1.30e-19 Zinc finger, LIM-type
ENSSSCP00000020221 SMART SM00389 IPR001356 108 170 1.00e-23 Homeobox domain
ENSSSCP00000020221 SUPERFAMILY SSF46689 IPR009057 99 166 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSSSCP00000020221 PF00046 4.7e-18 Homeobox Homeobox domain
ENSSSCP00000020221 PF00412 8.8e-16 LIM LIM domain
ENSSSCP00000020221 PF05920 7.7e-05 Homeobox_KN Homeobox KN domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSSSCP00000020221 GO:0006351 biological_process transcription, DNA-templated
ENSSSCP00000020221 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSSSCP00000020221 GO:0007275 biological_process multicellular organismal development
ENSSSCP00000020221 GO:0005634 cellular_component nucleus
ENSSSCP00000020221 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSSSCP00000020221 GO:0008270 molecular_function zinc ion binding
ENSSSCP00000020221 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9986 Oryctolagus cuniculus 100338248 9597 Pan paniscus 100991773
9555 Papio anubis 101014470 9595 Gorilla gorilla 101151857
9669 Mustela putorius furo 101693093 10090 Mus musculus 110648
9615 Canis familiaris 609061 7070 Tribolium castaneum 655586
9544 Macaca mulatta 694542 9598 Pan troglodytes 747979
9358 Choloepus hoffmanni ENSCHOG00000013620 51511 Ciona savignyi ENSCSAVG00000000947
9361 Dasypus novemcinctus ENSDNOG00000012261 10020 Dipodomys ordii ENSDORG00000014036
30608 Microcebus murinus ENSMICG00000009958 13616 Monodelphis domestica ENSMODG00000001270
30611 Otolemur garnettii ENSOGAG00000011315 13735 Pelodiscus sinensis ENSPSIG00000005639
132908 Pteropus vampyrus ENSPVAG00000008636 7029 Acyrthosiphon pisum 100166469
9483 Callithrix jacchus 100387212 9646 Ailuropoda melanoleuca 100475199
9785 Loxodonta africana 100658788 10141 Cavia porcellus 100726831
10029 Cricetulus griseus 100760113 39432 Saimiri boliviensis 101039698
9685 Felis catus 101081519 7227 Drosophila melanogaster 39406
28377 Anolis carolinensis ENSACAG00000004557 7719 Ciona intestinalis ENSCING00000013048
9371 Echinops telfairi ENSETEG00000005532 7897 Latimeria chalumnae ENSLACG00000014991
9103 Meleagris gallopavo ENSMGAG00000003603 59463 Myotis lucifugus ENSMLUG00000010463
61853 Nomascus leucogenys ENSNLEG00000014674 9258 Ornithorhynchus anatinus ENSOANG00000022733
9978 Ochotona princeps ENSOPRG00000014466 9813 Procavia capensis ENSPCAG00000006614
9305 Sarcophilus harrisii ENSSHAG00000014535 43179 Ictidomys tridecemlineatus ENSSTOG00000005189
37347 Tupaia belangeri ENSTBEG00000014918 59729 Taeniopygia guttata ENSTGUG00000017316
9478 Tarsius syrichta ENSTSYG00000012930 9739 Tursiops truncatus ENSTTRG00000003649
30538 Vicugna pacos ENSVPAG00000004576 8364 Xenopus tropicalis ENSXETG00000013183

Paralogs
ENSSSCG00000005606