Basic Information | |||
Gene ID | ENSTGUG00000017316 | ||
Gene Name | LMX1A | ||
Full Name | Uncharacterized protein | ||
Organism | Taeniopygia guttata [59729] |
Cross Reference | |||
UniProt | H1A3X9 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSTGUP00000017593 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 169 | 235 | 2.10e-23 | Homeodomain-like |
ENSTGUP00000017593 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 21 | 86 | 4.70e-16 | Zinc finger, LIM-type |
ENSTGUP00000017593 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 87 | 139 | 3.30e-16 | Zinc finger, LIM-type |
ENSTGUP00000017593 | Pfam | PF00046 | IPR001356 | 184 | 240 | 1.40e-17 | Homeobox domain |
ENSTGUP00000017593 | Pfam | PF00412 | IPR001781 | 24 | 79 | 1.80e-14 | Zinc finger, LIM-type |
ENSTGUP00000017593 | Pfam | PF00412 | IPR001781 | 83 | 140 | 2.40e-16 | Zinc finger, LIM-type |
ENSTGUP00000017593 | ProSitePatterns | PS00027 | IPR017970 | 216 | 239 | - | Homeobox, conserved site |
ENSTGUP00000017593 | ProSitePatterns | PS00478 | IPR001781 | 24 | 58 | - | Zinc finger, LIM-type |
ENSTGUP00000017593 | ProSitePatterns | PS00478 | IPR001781 | 83 | 118 | - | Zinc finger, LIM-type |
ENSTGUP00000017593 | ProSiteProfiles | PS50023 | IPR001781 | 22 | 80 | 0.00e-00 | Zinc finger, LIM-type |
ENSTGUP00000017593 | ProSiteProfiles | PS50023 | IPR001781 | 81 | 143 | 0.00e-00 | Zinc finger, LIM-type |
ENSTGUP00000017593 | ProSiteProfiles | PS50071 | IPR001356 | 181 | 241 | 0.00e-00 | Homeobox domain |
ENSTGUP00000017593 | SMART | SM00132 | IPR001781 | 23 | 74 | 2.90e-17 | Zinc finger, LIM-type |
ENSTGUP00000017593 | SMART | SM00132 | IPR001781 | 82 | 136 | 6.70e-20 | Zinc finger, LIM-type |
ENSTGUP00000017593 | SMART | SM00389 | IPR001356 | 183 | 245 | 1.00e-23 | Homeobox domain |
ENSTGUP00000017593 | SUPERFAMILY | SSF46689 | IPR009057 | 175 | 241 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSTGUP00000017593 | PF00412 | 3.4e-31 | LIM | LIM domain |
ENSTGUP00000017593 | PF00046 | 8.2e-18 | Homeobox | Homeobox domain |
ENSTGUP00000017593 | PF05920 | 0.00011 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSTGUP00000017593 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSTGUP00000017593 | GO:0007275 | biological_process | multicellular organismal development |
ENSTGUP00000017593 | GO:0005634 | cellular_component | nucleus |
ENSTGUP00000017593 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSTGUP00000017593 | GO:0008270 | molecular_function | zinc ion binding |
ENSTGUP00000017593 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100121564 | 7029 | Acyrthosiphon pisum | 100166469 |
10224 | Saccoglossus kowalevskii | 100328994 | 9986 | Oryctolagus cuniculus | 100338248 |
9646 | Ailuropoda melanoleuca | 100475199 | 30195 | Bombus terrestris | 100644798 |
9785 | Loxodonta africana | 100658788 | 10141 | Cavia porcellus | 100726831 |
132113 | Bombus impatiens | 100744167 | 10029 | Cricetulus griseus | 100760113 |
7463 | Apis florea | 100872112 | 143995 | Megachile rotundata | 100879464 |
34638 | Metaseiulus occidentalis | 100909136 | 9597 | Pan paniscus | 100991773 |
9555 | Papio anubis | 101014470 | 39432 | Saimiri boliviensis | 101039698 |
9595 | Gorilla gorilla | 101151857 | 9669 | Mustela putorius furo | 101693093 |
10090 | Mus musculus | 110648 | 7668 | Strongylocentrotus purpuratus | 585635 |
9615 | Canis familiaris | 609061 | 9544 | Macaca mulatta | 694542 |
7460 | Apis mellifera | 724778 | 9598 | Pan troglodytes | 747979 |
9358 | Choloepus hoffmanni | ENSCHOG00000013620 | 51511 | Ciona savignyi | ENSCSAVG00000000947 |
9361 | Dasypus novemcinctus | ENSDNOG00000012261 | 10020 | Dipodomys ordii | ENSDORG00000014036 |
9371 | Echinops telfairi | ENSETEG00000005532 | 9103 | Meleagris gallopavo | ENSMGAG00000003603 |
59463 | Myotis lucifugus | ENSMLUG00000010463 | 13616 | Monodelphis domestica | ENSMODG00000001270 |
61853 | Nomascus leucogenys | ENSNLEG00000014674 | 9258 | Ornithorhynchus anatinus | ENSOANG00000022733 |
30611 | Otolemur garnettii | ENSOGAG00000011315 | 9978 | Ochotona princeps | ENSOPRG00000014466 |
13735 | Pelodiscus sinensis | ENSPSIG00000005639 | 9305 | Sarcophilus harrisii | ENSSHAG00000014535 |
9823 | Sus scrofa | ENSSSCG00000006329 | 37347 | Tupaia belangeri | ENSTBEG00000014918 |
9483 | Callithrix jacchus | 100387212 | 9685 | Felis catus | 101081519 |
7227 | Drosophila melanogaster | 39406 | 7070 | Tribolium castaneum | 655506 |
28377 | Anolis carolinensis | ENSACAG00000004557 | 7719 | Ciona intestinalis | ENSCING00000013048 |
9365 | Erinaceus europaeus | ENSEEUG00000007978 | 69293 | Gasterosteus aculeatus | ENSGACG00000018323 |
7897 | Latimeria chalumnae | ENSLACG00000014991 | 132908 | Pteropus vampyrus | ENSPVAG00000004265 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000005189 | 9478 | Tarsius syrichta | ENSTSYG00000012930 |
30538 | Vicugna pacos | ENSVPAG00000004576 | 8083 | Xiphophorus maculatus | ENSXMAG00000013334 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018553 | 9739 | Tursiops truncatus | ENSTTRG00000003649 |
8364 | Xenopus tropicalis | ENSXETG00000013183 |
Paralogs | |||
ENSTGUG00000007409 |