Bioinformatics.org
[Regeneron]
[Repositive.io]
[OMICtools]
Not logged in
  • Log in
  • Bioinformatics.org
    Membership (39402+) Group hosting [?] Wiki
    Franklin Award
    Sponsorships

    Careers
    About bioinformatics
    Bioinformatics training
    Bioinformatics jobs

    Research
    All information groups
    Online databases Online analysis tools Online education tools More tools

    Development
    All software groups
    FTP repository
    SVN & CVS repositories [?]
    Mailing lists

    Forums
    News & Commentary
  • Submit
  • Archives
  • Subscribe

  • Jobs Forum
    (Career Center)
  • Submit
  • Archives
  • Subscribe
  • CD-HIT: Sequence clustering software - News

    Latest announcements
    Submit Archive Subscribe
    First Bug Fixed!
    Submitted by Dan Bolser; posted on Monday, March 08, 2004

    Thanks to Luc Ducazu!
    CD-HIT project started at Bioinformatics.Org !
    Submitted by Dan Bolser; posted on Thursday, February 19, 2004 (1 comment)

    Weizhong Li has moved his popular cd-hit software to bioinformatics.org and created a new open source project!

    cd-hit is used in a wide variety of applications, helping many people quickly and efficiently create non-redundant sequence databases at high sequence identity. Now the software is open for community development - which means you too can help improve this already excellent package!

    We are looking for developers and researchers of all experience levels to...
    • Make cd-hit compatible with existing sequence IO libraries, to expand the range of allowed input formats.
    • Develop a range of useful output formats, including XML.
    • Package cd-hit with gnu configure utilities to expand the range of platforms for which cd-hit can be reliably used.
    • Research the all important sequence clustering benchmark 'sub project' of cd-hit, working to develop rigorous measures of sensitivity, selectivity and optimisation for a range of clustering tools and parameters.
    • Begin to KO the few existing bugs in the cd-hit bug list.
    If you use cd-hit, we would like to know!
    Submit Archive Subscribe

     

    [G6GFindr]
    Copyright © 2017 · Scilico, LLC