Basic Information
Gene ID 30544
Gene Name sox17
Full Name SRY-box containing gene 17
Organism Danio rerio [7955]

Cross Reference
UniProt Q5PQZ5 UniGene Dr.81308
PDB NULL OMIM NULL
KEGG dre:30544 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 7955.ENSDARP00000007443

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSDARP00000007443 Gene3D G3DSA:1.10.30.10 IPR009071 61 143 7.30e-33 High mobility group box domain
ENSDARP00000007443 Pfam PF00505 IPR009071 63 131 3.00e-24 High mobility group box domain
ENSDARP00000007443 ProSiteProfiles PS50118 IPR009071 63 131 0.00e-00 High mobility group box domain
ENSDARP00000007443 SMART SM00398 IPR009071 62 132 3.50e-28 High mobility group box domain
ENSDARP00000007443 SUPERFAMILY SSF47095 IPR009071 56 135 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSDARP00000007443 PF00505 1.5e-24 HMG_box HMG (high mobility group) box
ENSDARP00000007443 PF09011 1.4e-10 HMG_box_2 HMG-box domain
ENSDARP00000007443 PF12067 8.4e-07 Sox_C_TAD Sox C-terminal transactivation domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSDARP00000007443 GO:0006351 biological_process transcription, DNA-templated
ENSDARP00000007443 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSDARP00000007443 GO:0007275 biological_process multicellular organismal development
ENSDARP00000007443 GO:0007369 biological_process gastrulation
ENSDARP00000007443 GO:0016055 biological_process Wnt signaling pathway
ENSDARP00000007443 GO:0045893 biological_process positive regulation of transcription, DNA-templated
ENSDARP00000007443 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSDARP00000007443 GO:0005634 cellular_component nucleus
ENSDARP00000007443 GO:0003677 molecular_function DNA binding
ENSDARP00000007443 GO:0008013 molecular_function beta-catenin binding
ENSDARP00000007443 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100030119 8364 Xenopus tropicalis 100038235
7425 Nasonia vitripennis 100120206 7029 Acyrthosiphon pisum 100165234
8090 Oryzias latipes 100304455 9483 Callithrix jacchus 100396115
61853 Nomascus leucogenys 100591356 143995 Megachile rotundata 100876699
9597 Pan paniscus 100969672 9555 Papio anubis 101022699
39432 Saimiri boliviensis 101053885 31033 Takifugu rubripes 101080200
9669 Mustela putorius furo 101683331 43179 Ictidomys tridecemlineatus 101966515
8083 Xiphophorus maculatus 102225699 7897 Latimeria chalumnae 102363300
59463 Myotis lucifugus 102427708 10116 Rattus norvegicus 312936
7227 Drosophila melanogaster 36575 9913 Bos taurus 534010
7668 Strongylocentrotus purpuratus 587141 9606 Homo sapiens 64321
28377 Anolis carolinensis ENSACAG00000017977 9646 Ailuropoda melanoleuca ENSAMEG00000011673
7719 Ciona intestinalis ENSCING00000007173 10141 Cavia porcellus ENSCPOG00000000892
51511 Ciona savignyi ENSCSAVG00000008188 9796 Equus caballus ENSECAG00000009206
9371 Echinops telfairi ENSETEG00000016915 69293 Gasterosteus aculeatus ENSGACG00000004347
9595 Gorilla gorilla ENSGGOG00000023175 8049 Gadus morhua ENSGMOG00000005913
9785 Loxodonta africana ENSLAFG00000028829 9315 Macropus eugenii ENSMEUG00000011391
30608 Microcebus murinus ENSMICG00000000709 9986 Oryctolagus cuniculus ENSOCUG00000012651
30611 Otolemur garnettii ENSOGAG00000034932 9978 Ochotona princeps ENSOPRG00000007021
9813 Procavia capensis ENSPCAG00000003188 132908 Pteropus vampyrus ENSPVAG00000009339
59729 Taeniopygia guttata ENSTGUG00000011034 99883 Tetraodon nigroviridis ENSTNIG00000017129
30538 Vicugna pacos ENSVPAG00000005064