Basic Information
Gene ID 100304449
Gene Name sox6b
Full Name SRY-box containing gene 6b
Organism Oryzias latipes [8090]

Cross Reference
UniProt C3VV10 UniGene Ola.28089
PDB NULL OMIM NULL
KEGG ola:100304449 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8090.ENSORLP00000008419

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSORLP00000008419 Gene3D G3DSA:1.10.30.10 IPR009071 594 674 3.60e-33 High mobility group box domain
ENSORLP00000008419 PANTHER PTHR10270:SF89 IPR027153 35 804 0.00e-00 Transcription factor Sox-6
ENSORLP00000008419 Pfam PF00505 IPR009071 596 664 3.70e-22 High mobility group box domain
ENSORLP00000008419 ProSiteProfiles PS50118 IPR009071 596 664 0.00e-00 High mobility group box domain
ENSORLP00000008419 SMART SM00398 IPR009071 595 665 6.60e-29 High mobility group box domain
ENSORLP00000008419 SUPERFAMILY SSF47095 IPR009071 595 673 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSORLP00000008419 PF00505 3.7e-22 HMG_box HMG (high mobility group) box
ENSORLP00000008419 PF09011 1.2e-08 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSORLP00000008419 GO:0006351 biological_process transcription, DNA-templated
ENSORLP00000008419 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSORLP00000008419 GO:0005634 cellular_component nucleus
ENSORLP00000008419 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7029 Acyrthosiphon pisum 100168120 7425 Nasonia vitripennis 100119354
30195 Bombus terrestris 100650599 8128 Oreochromis niloticus 100694759
132113 Bombus impatiens 100741472 10029 Cricetulus griseus 100755098
143995 Megachile rotundata 100882181 34638 Metaseiulus occidentalis 100904962
9597 Pan paniscus 100975998 7897 Latimeria chalumnae 102347503
10090 Mus musculus 20679 7227 Drosophila melanogaster 43844
9913 Bos taurus 534321 7955 Danio rerio 567154
9544 Macaca mulatta 697831 28377 Anolis carolinensis ENSACAG00000012782
9615 Canis familiaris ENSCAFG00000008607 9796 Equus caballus ENSECAG00000010880
9365 Erinaceus europaeus ENSEEUG00000006749 69293 Gasterosteus aculeatus ENSGACG00000015635
8049 Gadus morhua ENSGMOG00000009040 9785 Loxodonta africana ENSLAFG00000002917
9315 Macropus eugenii ENSMEUG00000010268 9103 Meleagris gallopavo ENSMGAG00000006785
30608 Microcebus murinus ENSMICG00000008914 59463 Myotis lucifugus ENSMLUG00000007911
13616 Monodelphis domestica ENSMODG00000007224 9669 Mustela putorius furo ENSMPUG00000013283
9258 Ornithorhynchus anatinus ENSOANG00000022345 9986 Oryctolagus cuniculus ENSOCUG00000012557
30611 Otolemur garnettii ENSOGAG00000005358 7757 Petromyzon marinus ENSPMAG00000006026
9601 Pongo abelii ENSPPYG00000003459 13735 Pelodiscus sinensis ENSPSIG00000009027
9598 Pan troglodytes ENSPTRG00000003393 132908 Pteropus vampyrus ENSPVAG00000011735
42254 Sorex araneus ENSSARG00000011926 9305 Sarcophilus harrisii ENSSHAG00000006502
9823 Sus scrofa ENSSSCG00000030418 43179 Ictidomys tridecemlineatus ENSSTOG00000013609
31033 Takifugu rubripes ENSTRUG00000017299 9478 Tarsius syrichta ENSTSYG00000007395
9739 Tursiops truncatus ENSTTRG00000003214 30538 Vicugna pacos ENSVPAG00000003132
8364 Xenopus tropicalis ENSXETG00000016058 8083 Xiphophorus maculatus ENSXMAG00000007070
10141 Cavia porcellus 100715958 7463 Apis florea 100863610
39432 Saimiri boliviensis 101039628 7070 Tribolium castaneum 663268
9685 Felis catus ENSFCAG00000002214 9595 Gorilla gorilla ENSGGOG00000010884
59729 Taeniopygia guttata ENSTGUG00000008522 99883 Tetraodon nigroviridis ENSTNIG00000009384

Paralogs
ENSORLG00000012066