Basic Information | |||
Gene ID | 567154 | ||
Gene Name | sox6 | ||
Full Name | SRY-box containing protein 6 | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | B2CNY6 | UniGene | Dr.5234 |
PDB | NULL | OMIM | NULL |
KEGG | dre:567154 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 7955.ENSDARP00000091770 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSDARP00000091770 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 557 | 637 | 1.70e-33 | High mobility group box domain |
ENSDARP00000091770 | PANTHER | PTHR10270:SF89 | IPR027153 | 36 | 768 | 0.00e-00 | Transcription factor Sox-6 |
ENSDARP00000091770 | Pfam | PF00505 | IPR009071 | 559 | 627 | 6.40e-22 | High mobility group box domain |
ENSDARP00000091770 | ProSiteProfiles | PS50118 | IPR009071 | 559 | 627 | 0.00e-00 | High mobility group box domain |
ENSDARP00000091770 | SMART | SM00398 | IPR009071 | 558 | 628 | 5.50e-28 | High mobility group box domain |
ENSDARP00000091770 | SUPERFAMILY | SSF47095 | IPR009071 | 558 | 636 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSDARP00000091770 | PF00505 | 1.4e-22 | HMG_box | HMG (high mobility group) box |
ENSDARP00000091770 | PF09011 | 1.8e-08 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSDARP00000091770 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSDARP00000091770 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSDARP00000091770 | GO:0005634 | cellular_component | nucleus |
ENSDARP00000091770 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100119354 | 7029 | Acyrthosiphon pisum | 100168120 |
8090 | Oryzias latipes | 100304449 | 30195 | Bombus terrestris | 100650599 |
10141 | Cavia porcellus | 100715958 | 7463 | Apis florea | 100863610 |
143995 | Megachile rotundata | 100882181 | 34638 | Metaseiulus occidentalis | 100904962 |
9597 | Pan paniscus | 100975998 | 39432 | Saimiri boliviensis | 101039628 |
7897 | Latimeria chalumnae | 102347503 | 9913 | Bos taurus | 534321 |
8128 | Oreochromis niloticus | 100694759 | 132113 | Bombus impatiens | 100741472 |
10029 | Cricetulus griseus | 100755098 | 10090 | Mus musculus | 20679 |
7668 | Strongylocentrotus purpuratus | 373200 | 7719 | Ciona intestinalis | ENSCING00000015003 |
9258 | Ornithorhynchus anatinus | ENSOANG00000022345 | 30611 | Otolemur garnettii | ENSOGAG00000005358 |
132908 | Pteropus vampyrus | ENSPVAG00000011735 | 9305 | Sarcophilus harrisii | ENSSHAG00000006502 |
31033 | Takifugu rubripes | ENSTRUG00000017299 | 8083 | Xiphophorus maculatus | ENSXMAG00000007070 |
7070 | Tribolium castaneum | 663268 | 9544 | Macaca mulatta | 697831 |
28377 | Anolis carolinensis | ENSACAG00000012782 | 9615 | Canis familiaris | ENSCAFG00000008607 |
9358 | Choloepus hoffmanni | ENSCHOG00000005751 | 9796 | Equus caballus | ENSECAG00000010880 |
9365 | Erinaceus europaeus | ENSEEUG00000006749 | 9371 | Echinops telfairi | ENSETEG00000001898 |
9685 | Felis catus | ENSFCAG00000002214 | 69293 | Gasterosteus aculeatus | ENSGACG00000015635 |
9595 | Gorilla gorilla | ENSGGOG00000010884 | 8049 | Gadus morhua | ENSGMOG00000009040 |
9785 | Loxodonta africana | ENSLAFG00000002917 | 9315 | Macropus eugenii | ENSMEUG00000010268 |
9103 | Meleagris gallopavo | ENSMGAG00000006785 | 30608 | Microcebus murinus | ENSMICG00000008914 |
59463 | Myotis lucifugus | ENSMLUG00000007911 | 13616 | Monodelphis domestica | ENSMODG00000007224 |
9669 | Mustela putorius furo | ENSMPUG00000013283 | 9986 | Oryctolagus cuniculus | ENSOCUG00000012557 |
7757 | Petromyzon marinus | ENSPMAG00000006026 | 9601 | Pongo abelii | ENSPPYG00000003459 |
13735 | Pelodiscus sinensis | ENSPSIG00000009027 | 9598 | Pan troglodytes | ENSPTRG00000003393 |
42254 | Sorex araneus | ENSSARG00000011926 | 9823 | Sus scrofa | ENSSSCG00000030418 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000013609 | 37347 | Tupaia belangeri | ENSTBEG00000002476 |
59729 | Taeniopygia guttata | ENSTGUG00000008522 | 99883 | Tetraodon nigroviridis | ENSTNIG00000009384 |
9478 | Tarsius syrichta | ENSTSYG00000007395 | 9739 | Tursiops truncatus | ENSTTRG00000003214 |
30538 | Vicugna pacos | ENSVPAG00000003132 | 8364 | Xenopus tropicalis | ENSXETG00000016058 |