Basic Information | |||
Gene ID | 100371641 | ||
Gene Name | LOC100371641 | ||
Full Name | PREDICTED: TBP-associated factor 4-like [Saccoglossus kowalevskii]. | ||
Organism | Saccoglossus kowalevskii [10224] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_002739729 | Gene3D | G3DSA:1.10.20.10 | IPR009072 | 784 | 831 | 1.30e-22 | Histone-fold |
XP_002739729 | Pfam | PF05236 | IPR007900 | 746 | 998 | 1.50e-83 | Transcription initiation factor TFIID component TAF4 |
XP_002739729 | Pfam | PF07531 | IPR003894 | 563 | 599 | 3.90e-10 | TAFH/NHR1 |
XP_002739729 | SUPERFAMILY | SSF47113 | IPR009072 | 784 | 832 | 0.00e-00 | Histone-fold |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_002739729 | PF05236 | 0 | TAF4 | Transcription initiation factor TFIID component TAF4 family |
XP_002739729 | PF07531 | 3.9e-10 | TAFH | NHR1 homology to TAF |
XP_002739729 | PF12767 | 2.2e-05 | SAGA-Tad1 | Transcriptional regulator of RNA polII, SAGA, subunit |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_002739729 | GO:0006352 | biological_process | DNA-templated transcription, initiation |
XP_002739729 | GO:0006366 | biological_process | transcription from RNA polymerase II promoter |
XP_002739729 | GO:0006367 | biological_process | transcription initiation from RNA polymerase II promoter |
XP_002739729 | GO:0006368 | biological_process | transcription elongation from RNA polymerase II promoter |
XP_002739729 | GO:0010467 | biological_process | gene expression |
XP_002739729 | GO:0016032 | biological_process | viral process |
XP_002739729 | GO:0005634 | cellular_component | nucleus |
XP_002739729 | GO:0005654 | cellular_component | nucleoplasm |
XP_002739729 | GO:0005669 | cellular_component | transcription factor TFIID complex |
XP_002739729 | GO:0005730 | cellular_component | nucleolus |
XP_002739729 | GO:0005737 | cellular_component | cytoplasm |
XP_002739729 | GO:0003677 | molecular_function | DNA binding |
XP_002739729 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_002739729 | GO:0046982 | molecular_function | protein heterodimerization activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7955 | Danio rerio | 100150678 | 9986 | Oryctolagus cuniculus | 100349838 |
7425 | Nasonia vitripennis | 100119872 | 6087 | Hydra magnipapillata | 100207984 |
10029 | Cricetulus griseus | 100769929 | 34638 | Metaseiulus occidentalis | 100900110 |
9597 | Pan paniscus | 100970035 | 7227 | Drosophila melanogaster | 39765 |
9606 | Homo sapiens | 6875 | 9615 | Canis familiaris | ENSCAFG00000012509 |
10141 | Cavia porcellus | ENSCPOG00000001414 | 10020 | Dipodomys ordii | ENSDORG00000014517 |
9685 | Felis catus | ENSFCAG00000011994 | 69293 | Gasterosteus aculeatus | ENSGACG00000007729 |
8049 | Gadus morhua | ENSGMOG00000002528 | 7897 | Latimeria chalumnae | ENSLACG00000010597 |
9315 | Macropus eugenii | ENSMEUG00000013666 | 9669 | Mustela putorius furo | ENSMPUG00000006462 |
30611 | Otolemur garnettii | ENSOGAG00000024820 | 8090 | Oryzias latipes | ENSORLG00000000264 |
13735 | Pelodiscus sinensis | ENSPSIG00000002612 | 132908 | Pteropus vampyrus | ENSPVAG00000009968 |
10116 | Rattus norvegicus | ENSRNOG00000045974 | 42254 | Sorex araneus | ENSSARG00000006618 |
59729 | Taeniopygia guttata | ENSTGUG00000007892 | 99883 | Tetraodon nigroviridis | ENSTNIG00000007089 |
31033 | Takifugu rubripes | ENSTRUG00000015791 | 9478 | Tarsius syrichta | ENSTSYG00000009936 |
30195 | Bombus terrestris | 100644560 | 7463 | Apis florea | 100871646 |
9555 | Papio anubis | 101000177 | 39432 | Saimiri boliviensis | 101046014 |
8128 | Oreochromis niloticus | 102082936 | 10090 | Mus musculus | 228980 |
9598 | Pan troglodytes | 458381 | 7070 | Tribolium castaneum | 654970 |
28377 | Anolis carolinensis | ENSACAG00000016214 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000014196 |
9913 | Bos taurus | ENSBTAG00000047991 | 9358 | Choloepus hoffmanni | ENSCHOG00000007830 |
7719 | Ciona intestinalis | ENSCING00000009553 | 9483 | Callithrix jacchus | ENSCJAG00000014438 |
51511 | Ciona savignyi | ENSCSAVG00000007080 | 9796 | Equus caballus | ENSECAG00000023048 |
9365 | Erinaceus europaeus | ENSEEUG00000008763 | 9371 | Echinops telfairi | ENSETEG00000011393 |
9031 | Gallus gallus | ENSGALG00000005121 | 9595 | Gorilla gorilla | ENSGGOG00000002111 |
9785 | Loxodonta africana | ENSLAFG00000001807 | 9103 | Meleagris gallopavo | ENSMGAG00000005271 |
30608 | Microcebus murinus | ENSMICG00000007838 | 59463 | Myotis lucifugus | ENSMLUG00000010291 |
9544 | Macaca mulatta | ENSMMUG00000008696 | 13616 | Monodelphis domestica | ENSMODG00000016684 |
61853 | Nomascus leucogenys | ENSNLEG00000015722 | 9258 | Ornithorhynchus anatinus | ENSOANG00000003371 |
9813 | Procavia capensis | ENSPCAG00000004596 | 9601 | Pongo abelii | ENSPPYG00000029916 |
9305 | Sarcophilus harrisii | ENSSHAG00000013545 | 9823 | Sus scrofa | ENSSSCG00000024694 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000014768 | 37347 | Tupaia belangeri | ENSTBEG00000007812 |
9739 | Tursiops truncatus | ENSTTRG00000009139 | 30538 | Vicugna pacos | ENSVPAG00000011346 |
8083 | Xiphophorus maculatus | ENSXMAG00000007128 |