Basic Information | |||
Gene ID | 100900110 | ||
Gene Name | LOC100900110 | ||
Full Name | PREDICTED: transcription initiation factor TFIID subunit 4-like[Metaseiulus occidentalis]. | ||
Organism | Metaseiulus occidentalis [34638] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003741274 | Gene3D | G3DSA:1.10.20.10 | IPR009072 | 281 | 328 | 1.60e-16 | Histone-fold |
XP_003741274 | Pfam | PF05236 | IPR007900 | 246 | 480 | 1.90e-69 | Transcription initiation factor TFIID component TAF4 |
XP_003741274 | Pfam | PF07531 | IPR003894 | 43 | 131 | 5.60e-33 | TAFH/NHR1 |
XP_003741274 | Pfam | PF12767 | IPR024738 | 268 | 326 | 8.30e-07 | Transcriptional coactivator Hfi1/Transcriptional adapter 1 |
XP_003741274 | ProSiteProfiles | PS51119 | IPR003894 | 35 | 136 | 0.00e-00 | TAFH/NHR1 |
XP_003741274 | SMART | SM00549 | IPR003894 | 43 | 133 | 1.50e-46 | TAFH/NHR1 |
XP_003741274 | SUPERFAMILY | SSF47113 | IPR009072 | 281 | 329 | 0.00e-00 | Histone-fold |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003741274 | PF05236 | 0 | TAF4 | Transcription initiation factor TFIID component TAF4 family |
XP_003741274 | PF07531 | 2.3e-33 | TAFH | NHR1 homology to TAF |
XP_003741274 | PF12767 | 8.3e-07 | SAGA-Tad1 | Transcriptional regulator of RNA polII, SAGA, subunit |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003741274 | GO:0006352 | biological_process | DNA-templated transcription, initiation |
XP_003741274 | GO:0006366 | biological_process | transcription from RNA polymerase II promoter |
XP_003741274 | GO:0006367 | biological_process | transcription initiation from RNA polymerase II promoter |
XP_003741274 | GO:0006368 | biological_process | transcription elongation from RNA polymerase II promoter |
XP_003741274 | GO:0010467 | biological_process | gene expression |
XP_003741274 | GO:0016032 | biological_process | viral process |
XP_003741274 | GO:0005634 | cellular_component | nucleus |
XP_003741274 | GO:0005654 | cellular_component | nucleoplasm |
XP_003741274 | GO:0005669 | cellular_component | transcription factor TFIID complex |
XP_003741274 | GO:0005730 | cellular_component | nucleolus |
XP_003741274 | GO:0005737 | cellular_component | cytoplasm |
XP_003741274 | GO:0003677 | molecular_function | DNA binding |
XP_003741274 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_003741274 | GO:0046982 | molecular_function | protein heterodimerization activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100119872 | 7955 | Danio rerio | 100150678 |
9986 | Oryctolagus cuniculus | 100349838 | 10224 | Saccoglossus kowalevskii | 100371641 |
30195 | Bombus terrestris | 100644560 | 132113 | Bombus impatiens | 100746770 |
10029 | Cricetulus griseus | 100769929 | 7463 | Apis florea | 100871646 |
7029 | Acyrthosiphon pisum | 100159915 | 6087 | Hydra magnipapillata | 100207984 |
143995 | Megachile rotundata | 100875934 | 9606 | Homo sapiens | 6875 |
9615 | Canis familiaris | ENSCAFG00000012509 | 10141 | Cavia porcellus | ENSCPOG00000001414 |
9669 | Mustela putorius furo | ENSMPUG00000007569 | 9597 | Pan paniscus | 100970035 |
9555 | Papio anubis | 101000177 | 39432 | Saimiri boliviensis | 101046014 |
8128 | Oreochromis niloticus | 102082936 | 13735 | Pelodiscus sinensis | 102448897 |
10090 | Mus musculus | 228980 | 7227 | Drosophila melanogaster | 39765 |
9598 | Pan troglodytes | 458381 | 7668 | Strongylocentrotus purpuratus | 576814 |
7070 | Tribolium castaneum | 654970 | 28377 | Anolis carolinensis | ENSACAG00000016214 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000014196 | 9913 | Bos taurus | ENSBTAG00000047991 |
9358 | Choloepus hoffmanni | ENSCHOG00000007830 | 7719 | Ciona intestinalis | ENSCING00000009553 |
9483 | Callithrix jacchus | ENSCJAG00000014438 | 51511 | Ciona savignyi | ENSCSAVG00000007080 |
10020 | Dipodomys ordii | ENSDORG00000014517 | 9796 | Equus caballus | ENSECAG00000023048 |
9365 | Erinaceus europaeus | ENSEEUG00000008763 | 9371 | Echinops telfairi | ENSETEG00000011393 |
9685 | Felis catus | ENSFCAG00000011994 | 69293 | Gasterosteus aculeatus | ENSGACG00000009979 |
9031 | Gallus gallus | ENSGALG00000005121 | 9595 | Gorilla gorilla | ENSGGOG00000002111 |
8049 | Gadus morhua | ENSGMOG00000017138 | 7897 | Latimeria chalumnae | ENSLACG00000002425 |
9785 | Loxodonta africana | ENSLAFG00000001807 | 9315 | Macropus eugenii | ENSMEUG00000013666 |
9103 | Meleagris gallopavo | ENSMGAG00000005271 | 30608 | Microcebus murinus | ENSMICG00000004029 |
59463 | Myotis lucifugus | ENSMLUG00000010291 | 9544 | Macaca mulatta | ENSMMUG00000008696 |
13616 | Monodelphis domestica | ENSMODG00000021512 | 61853 | Nomascus leucogenys | ENSNLEG00000015722 |
9258 | Ornithorhynchus anatinus | ENSOANG00000003371 | 30611 | Otolemur garnettii | ENSOGAG00000014592 |
9978 | Ochotona princeps | ENSOPRG00000004667 | 8090 | Oryzias latipes | ENSORLG00000014154 |
9813 | Procavia capensis | ENSPCAG00000004596 | 7757 | Petromyzon marinus | ENSPMAG00000003074 |
9601 | Pongo abelii | ENSPPYG00000029916 | 132908 | Pteropus vampyrus | ENSPVAG00000009968 |
10116 | Rattus norvegicus | ENSRNOG00000045974 | 42254 | Sorex araneus | ENSSARG00000006618 |
9305 | Sarcophilus harrisii | ENSSHAG00000013545 | 9823 | Sus scrofa | ENSSSCG00000024694 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000014768 | 37347 | Tupaia belangeri | ENSTBEG00000007812 |
59729 | Taeniopygia guttata | ENSTGUG00000010600 | 99883 | Tetraodon nigroviridis | ENSTNIG00000007089 |
31033 | Takifugu rubripes | ENSTRUG00000015791 | 9478 | Tarsius syrichta | ENSTSYG00000009936 |
9739 | Tursiops truncatus | ENSTTRG00000009139 | 30538 | Vicugna pacos | ENSVPAG00000011346 |
8364 | Xenopus tropicalis | ENSXETG00000032722 | 8083 | Xiphophorus maculatus | ENSXMAG00000015488 |