Basic Information | |||
Gene ID | 100878525 | ||
Gene Name | LOC100878525 | ||
Full Name | PREDICTED: transcription factor SOX-2-like [Megachile rotundata]. | ||
Organism | Megachile rotundata [143995] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003704177 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 141 | 220 | 2.10e-40 | High mobility group box domain |
XP_003704177 | Pfam | PF00505 | IPR009071 | 142 | 210 | 1.80e-26 | High mobility group box domain |
XP_003704177 | Pfam | PF12336 | IPR022097 | 211 | 288 | 8.40e-11 | Transcription factor SOX |
XP_003704177 | ProSiteProfiles | PS50118 | IPR009071 | 142 | 210 | 0.00e-00 | High mobility group box domain |
XP_003704177 | SMART | SM00398 | IPR009071 | 141 | 211 | 2.50e-31 | High mobility group box domain |
XP_003704177 | SUPERFAMILY | SSF47095 | IPR009071 | 129 | 214 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003704177 | PF00505 | 7.7e-27 | HMG_box | HMG (high mobility group) box |
XP_003704177 | PF09011 | 6.8e-11 | HMG_box_2 | HMG-box domain |
XP_003704177 | PF12336 | 8.4e-11 | SOXp | SOX transcription factor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003704177 | GO:0000122 | biological_process | negative regulation of transcription from RNA polymerase II promoter |
XP_003704177 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_003704177 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_003704177 | GO:0007275 | biological_process | multicellular organismal development |
XP_003704177 | GO:0005634 | cellular_component | nucleus |
XP_003704177 | GO:0003677 | molecular_function | DNA binding |
XP_003704177 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
30195 | Bombus terrestris | 100643013 | 7029 | Acyrthosiphon pisum | 100164548 |
6087 | Hydra magnipapillata | 100205840 | 10224 | Saccoglossus kowalevskii | 100303496 |
7425 | Nasonia vitripennis | 100678051 | 132113 | Bombus impatiens | 100742000 |
7463 | Apis florea | 100866912 | 7897 | Latimeria chalumnae | 102366157 |
7227 | Drosophila melanogaster | 44275 | 13735 | Pelodiscus sinensis | 102443720 |
9031 | Gallus gallus | 396105 | 7070 | Tribolium castaneum | 663351 |
9796 | Equus caballus | ENSECAG00000010653 |