Basic Information | |||
Gene ID | 100742000 | ||
Gene Name | LOC100742000 | ||
Full Name | PREDICTED: transcription factor SOX-2-like [Bombus impatiens]. | ||
Organism | Bombus impatiens [132113] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003494453 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 138 | 217 | 2.00e-40 | High mobility group box domain |
XP_003494453 | Pfam | PF00505 | IPR009071 | 139 | 207 | 1.70e-26 | High mobility group box domain |
XP_003494453 | Pfam | PF12336 | IPR022097 | 208 | 286 | 1.10e-09 | Transcription factor SOX |
XP_003494453 | ProSiteProfiles | PS50118 | IPR009071 | 139 | 207 | 0.00e-00 | High mobility group box domain |
XP_003494453 | SMART | SM00398 | IPR009071 | 138 | 208 | 2.50e-31 | High mobility group box domain |
XP_003494453 | SUPERFAMILY | SSF47095 | IPR009071 | 126 | 211 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003494453 | PF00505 | 7.7e-27 | HMG_box | HMG (high mobility group) box |
XP_003494453 | PF09011 | 6.5e-11 | HMG_box_2 | HMG-box domain |
XP_003494453 | PF12336 | 1.1e-09 | SOXp | SOX transcription factor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003494453 | GO:0000122 | biological_process | negative regulation of transcription from RNA polymerase II promoter |
XP_003494453 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_003494453 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_003494453 | GO:0007275 | biological_process | multicellular organismal development |
XP_003494453 | GO:0005634 | cellular_component | nucleus |
XP_003494453 | GO:0003677 | molecular_function | DNA binding |
XP_003494453 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
6087 | Hydra magnipapillata | 100205840 | 10224 | Saccoglossus kowalevskii | 100303496 |
9601 | Pongo abelii | 100460719 | 30195 | Bombus terrestris | 100643013 |
7029 | Acyrthosiphon pisum | 100164548 | 7425 | Nasonia vitripennis | 100678051 |
7463 | Apis florea | 100866912 | 30611 | Otolemur garnettii | 100963354 |
31033 | Takifugu rubripes | 101073272 | 8090 | Oryzias latipes | 101162114 |
7897 | Latimeria chalumnae | 102366157 | 7227 | Drosophila melanogaster | 44275 |
9258 | Ornithorhynchus anatinus | ENSOANG00000004458 | 42254 | Sorex araneus | ENSSARG00000006102 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000011011 | 143995 | Megachile rotundata | 100878525 |
9555 | Papio anubis | 101022620 | 13735 | Pelodiscus sinensis | 102443720 |
9031 | Gallus gallus | 396105 | 8364 | Xenopus tropicalis | 407873 |
9598 | Pan troglodytes | 460869 | 9615 | Canis familiaris | 488092 |
10116 | Rattus norvegicus | 499593 | 7070 | Tribolium castaneum | 663351 |
9606 | Homo sapiens | 6657 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000011029 |
9483 | Callithrix jacchus | ENSCJAG00000008401 | 10020 | Dipodomys ordii | ENSDORG00000007481 |
9796 | Equus caballus | ENSECAG00000010653 | 9371 | Echinops telfairi | ENSETEG00000006366 |
8049 | Gadus morhua | ENSGMOG00000019777 | 9986 | Oryctolagus cuniculus | ENSOCUG00000011135 |
9823 | Sus scrofa | ENSSSCG00000011771 | 9739 | Tursiops truncatus | ENSTTRG00000004853 |
30538 | Vicugna pacos | ENSVPAG00000010334 |