Basic Information
Gene ID 100303496
Gene Name NULL
Full Name Sox1/2/3
Organism Saccoglossus kowalevskii [10224]

Cross Reference
UniProt Q7YTD4 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001158377 Gene3D G3DSA:1.10.30.10 IPR009071 39 118 1.70e-40 High mobility group box domain
NP_001158377 Pfam PF00505 IPR009071 40 108 5.30e-27 High mobility group box domain
NP_001158377 Pfam PF12336 IPR022097 109 193 1.70e-34 Transcription factor SOX
NP_001158377 ProSiteProfiles PS50118 IPR009071 40 108 0.00e-00 High mobility group box domain
NP_001158377 SMART SM00398 IPR009071 39 109 2.40e-31 High mobility group box domain
NP_001158377 SUPERFAMILY SSF47095 IPR009071 27 112 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001158377 PF12336 1.7e-34 SOXp SOX transcription factor
NP_001158377 PF00505 2.9e-27 HMG_box HMG (high mobility group) box
NP_001158377 PF09011 9.3e-12 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001158377 GO:0000122 biological_process negative regulation of transcription from RNA polymerase II promoter
NP_001158377 GO:0006351 biological_process transcription, DNA-templated
NP_001158377 GO:0006355 biological_process regulation of transcription, DNA-templated
NP_001158377 GO:0007275 biological_process multicellular organismal development
NP_001158377 GO:0005634 cellular_component nucleus
NP_001158377 GO:0003677 molecular_function DNA binding
NP_001158377 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
8090 Oryzias latipes 100049368 7029 Acyrthosiphon pisum 100164548
6087 Hydra magnipapillata 100205840 7425 Nasonia vitripennis 100678051
8128 Oreochromis niloticus 100698575 132113 Bombus impatiens 100742000
7463 Apis florea 100866912 30611 Otolemur garnettii 100963354
31033 Takifugu rubripes 101073272 7897 Latimeria chalumnae 102366157
8364 Xenopus tropicalis 407873 7955 Danio rerio 436756
9598 Pan troglodytes 460869 10116 Rattus norvegicus 499593
7719 Ciona intestinalis ENSCING00000006005 9371 Echinops telfairi ENSETEG00000006366
9595 Gorilla gorilla ENSGGOG00000027572 9258 Ornithorhynchus anatinus ENSOANG00000004458
9986 Oryctolagus cuniculus ENSOCUG00000011135 9978 Ochotona princeps ENSOPRG00000017106
9813 Procavia capensis ENSPCAG00000009165 42254 Sorex araneus ENSSARG00000006102
9823 Sus scrofa ENSSSCG00000011771 43179 Ictidomys tridecemlineatus ENSSTOG00000011011
99883 Tetraodon nigroviridis ENSTNIG00000013867 9478 Tarsius syrichta ENSTSYG00000001164
9739 Tursiops truncatus ENSTTRG00000004853 9601 Pongo abelii 100460719
400682 Amphimedon queenslandica 100632156 30195 Bombus terrestris 100643013
10029 Cricetulus griseus 100759815 143995 Megachile rotundata 100878525
34638 Metaseiulus occidentalis 100898556 9555 Papio anubis 101022620
39432 Saimiri boliviensis 101037370 8083 Xiphophorus maculatus 102231761
13735 Pelodiscus sinensis 102443720 7668 Strongylocentrotus purpuratus 373202
9031 Gallus gallus 396105 9615 Canis familiaris 488092
7070 Tribolium castaneum 663351 9606 Homo sapiens 6657
9646 Ailuropoda melanoleuca ENSAMEG00000011029 9483 Callithrix jacchus ENSCJAG00000008401
10141 Cavia porcellus ENSCPOG00000022456 9361 Dasypus novemcinctus ENSDNOG00000023758
10020 Dipodomys ordii ENSDORG00000007481 9796 Equus caballus ENSECAG00000010653
9365 Erinaceus europaeus ENSEEUG00000013305 9685 Felis catus ENSFCAG00000029205
69293 Gasterosteus aculeatus ENSGACG00000017181 8049 Gadus morhua ENSGMOG00000020190
9785 Loxodonta africana ENSLAFG00000030155 59463 Myotis lucifugus ENSMLUG00000013015
13616 Monodelphis domestica ENSMODG00000021292 7757 Petromyzon marinus ENSPMAG00000009737
9305 Sarcophilus harrisii ENSSHAG00000007719 30538 Vicugna pacos ENSVPAG00000010334

Paralogs
100303553