Basic Information | |||
Gene ID | 102345911 | ||
Gene Name | NULL | ||
Full Name | Uncharacterized protein | ||
Organism | Latimeria chalumnae [7897] |
Cross Reference | |||
UniProt | H3ACX2 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSLACP00000007493 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 37 | 116 | 3.30e-40 | High mobility group box domain |
ENSLACP00000007493 | Pfam | PF00505 | IPR009071 | 38 | 106 | 8.90e-27 | High mobility group box domain |
ENSLACP00000007493 | Pfam | PF12336 | IPR022097 | 107 | 186 | 2.00e-31 | Transcription factor SOX |
ENSLACP00000007493 | ProSiteProfiles | PS50118 | IPR009071 | 38 | 106 | 0.00e-00 | High mobility group box domain |
ENSLACP00000007493 | SMART | SM00398 | IPR009071 | 37 | 107 | 1.10e-31 | High mobility group box domain |
ENSLACP00000007493 | SUPERFAMILY | SSF47095 | IPR009071 | 23 | 110 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSLACP00000007493 | PF12336 | 2e-31 | SOXp | SOX transcription factor |
ENSLACP00000007493 | PF00505 | 1.8e-27 | HMG_box | HMG (high mobility group) box |
ENSLACP00000007493 | PF09011 | 5.2e-11 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSLACP00000007493 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSLACP00000007493 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSLACP00000007493 | GO:0007275 | biological_process | multicellular organismal development |
ENSLACP00000007493 | GO:0005634 | cellular_component | nucleus |
ENSLACP00000007493 | GO:0003677 | molecular_function | DNA binding |
ENSLACP00000007493 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
8090 | Oryzias latipes | 100049368 | 9823 | Sus scrofa | 100623770 |
8128 | Oreochromis niloticus | 100698575 | 9555 | Papio anubis | 101023632 |
8083 | Xiphophorus maculatus | 102231761 | 13735 | Pelodiscus sinensis | 102464046 |
9606 | Homo sapiens | 6658 | 9544 | Macaca mulatta | 696412 |
10141 | Cavia porcellus | ENSCPOG00000022456 | 69293 | Gasterosteus aculeatus | ENSGACG00000017181 |
9595 | Gorilla gorilla | ENSGGOG00000008130 | 8049 | Gadus morhua | ENSGMOG00000020190 |
9785 | Loxodonta africana | ENSLAFG00000030155 | 59463 | Myotis lucifugus | ENSMLUG00000000946 |
13616 | Monodelphis domestica | ENSMODG00000013932 | 9986 | Oryctolagus cuniculus | ENSOCUG00000016779 |
30611 | Otolemur garnettii | ENSOGAG00000025781 | 9813 | Procavia capensis | ENSPCAG00000009165 |
9601 | Pongo abelii | ENSPPYG00000020784 | 9305 | Sarcophilus harrisii | ENSSHAG00000007719 |
7757 | Petromyzon marinus | ENSPMAG00000009737 |
Paralogs | |||
102348252 | 102359787 |