Basic Information | |||
Gene ID | ENSOCUG00000016779 | ||
Gene Name | SOX3 | ||
Full Name | Uncharacterized protein | ||
Organism | Oryctolagus cuniculus [9986] |
Cross Reference | |||
UniProt | G1TK04 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSOCUP00000017285 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 116 | 195 | 2.50e-39 | High mobility group box domain |
ENSOCUP00000017285 | Pfam | PF00505 | IPR009071 | 117 | 185 | 3.80e-26 | High mobility group box domain |
ENSOCUP00000017285 | Pfam | PF12336 | IPR022097 | 186 | 263 | 7.60e-26 | Transcription factor SOX |
ENSOCUP00000017285 | ProSiteProfiles | PS50118 | IPR009071 | 117 | 185 | 0.00e-00 | High mobility group box domain |
ENSOCUP00000017285 | SMART | SM00398 | IPR009071 | 116 | 186 | 1.10e-31 | High mobility group box domain |
ENSOCUP00000017285 | SUPERFAMILY | SSF47095 | IPR009071 | 114 | 200 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSOCUP00000017285 | PF00505 | 2.5e-26 | HMG_box | HMG (high mobility group) box |
ENSOCUP00000017285 | PF12336 | 2.9e-26 | SOXp | SOX transcription factor |
ENSOCUP00000017285 | PF09011 | 4.9e-10 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSOCUP00000017285 | GO:0000122 | biological_process | negative regulation of transcription from RNA polymerase II promoter |
ENSOCUP00000017285 | GO:0005634 | cellular_component | nucleus |
ENSOCUP00000017285 | GO:0003677 | molecular_function | DNA binding |
ENSOCUP00000017285 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
8090 | Oryzias latipes | 100049368 | 7897 | Latimeria chalumnae | 102345911 |
9544 | Macaca mulatta | 696412 | 9595 | Gorilla gorilla | ENSGGOG00000008130 |
8049 | Gadus morhua | ENSGMOG00000020190 | 9823 | Sus scrofa | 100623770 |
8128 | Oreochromis niloticus | 100698575 | 9555 | Papio anubis | 101023632 |
8083 | Xiphophorus maculatus | 102231761 | 13735 | Pelodiscus sinensis | 102464046 |
9606 | Homo sapiens | 6658 | 10141 | Cavia porcellus | ENSCPOG00000022456 |
9785 | Loxodonta africana | ENSLAFG00000030155 | 59463 | Myotis lucifugus | ENSMLUG00000000946 |
13616 | Monodelphis domestica | ENSMODG00000013932 | 9669 | Mustela putorius furo | ENSMPUG00000001759 |
9813 | Procavia capensis | ENSPCAG00000009165 | 9601 | Pongo abelii | ENSPPYG00000020784 |
132908 | Pteropus vampyrus | ENSPVAG00000003166 | 30611 | Otolemur garnettii | ENSOGAG00000025781 |
9305 | Sarcophilus harrisii | ENSSHAG00000007719 |