Basic Information | |||
Gene ID | 6658 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | SOX3 | ||
Full Name | Transcription factor SOX-3 | ||
Organism | Homo sapiens [9606] |
Cross Reference | |||
UniProt | P41225 | UniGene | Hs.157429 |
PDB | NULL | OMIM | 313430 |
KEGG | hsa:6658 | UCSC | uc004fbd.1 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 9606.ENSP00000359567 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSP00000359567 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 138 | 217 | 3.40e-39 | High mobility group box domain |
ENSP00000359567 | Pfam | PF00505 | IPR009071 | 139 | 207 | 5.00e-26 | High mobility group box domain |
ENSP00000359567 | Pfam | PF12336 | IPR022097 | 208 | 289 | 2.70e-22 | Transcription factor SOX |
ENSP00000359567 | ProSiteProfiles | PS50118 | IPR009071 | 139 | 207 | 0.00e-00 | High mobility group box domain |
ENSP00000359567 | SMART | SM00398 | IPR009071 | 138 | 208 | 1.10e-31 | High mobility group box domain |
ENSP00000359567 | SUPERFAMILY | SSF47095 | IPR009071 | 134 | 224 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSP00000359567 | PF00505 | 3.3e-26 | HMG_box | HMG (high mobility group) box |
ENSP00000359567 | PF12336 | 2.7e-22 | SOXp | SOX transcription factor |
ENSP00000359567 | PF09011 | 6.4e-10 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSP00000359567 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSP00000359567 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSP00000359567 | GO:0007275 | biological_process | multicellular organismal development |
ENSP00000359567 | GO:0005634 | cellular_component | nucleus |
ENSP00000359567 | GO:0003677 | molecular_function | DNA binding |
ENSP00000359567 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7897 | Latimeria chalumnae | 102345911 | 9823 | Sus scrofa | 100623770 |
9555 | Papio anubis | 101023632 | 13735 | Pelodiscus sinensis | 102464046 |
10141 | Cavia porcellus | ENSCPOG00000022456 | 9785 | Loxodonta africana | ENSLAFG00000030155 |
59463 | Myotis lucifugus | ENSMLUG00000000946 | 9669 | Mustela putorius furo | ENSMPUG00000001759 |
9813 | Procavia capensis | ENSPCAG00000009165 | 9601 | Pongo abelii | ENSPPYG00000020784 |
132908 | Pteropus vampyrus | ENSPVAG00000003166 | 9544 | Macaca mulatta | 696412 |
9483 | Callithrix jacchus | ENSCJAG00000022387 | 9595 | Gorilla gorilla | ENSGGOG00000008130 |
9986 | Oryctolagus cuniculus | ENSOCUG00000016779 | 30611 | Otolemur garnettii | ENSOGAG00000025781 |
9305 | Sarcophilus harrisii | ENSSHAG00000007719 |