Basic Information
Gene ID 223227 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Sox21
Full Name Transcription factor SOX-21
Organism Mus musculus [10090]

Cross Reference
UniProt Q811W0 UniGene Mm.70950
PDB NULL OMIM NULL
KEGG mmu:223227 UCSC uc007uyt.2

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSMUSP00000080815 Gene3D G3DSA:1.10.30.10 IPR009071 6 86 5.30e-42 High mobility group box domain
ENSMUSP00000080815 Pfam PF00505 IPR009071 8 76 3.20e-27 High mobility group box domain
ENSMUSP00000080815 Pfam PF12336 IPR022097 77 95 1.50e-06 Transcription factor SOX
ENSMUSP00000080815 ProSiteProfiles PS50118 IPR009071 8 76 0.00e-00 High mobility group box domain
ENSMUSP00000080815 SMART SM00398 IPR009071 7 77 2.70e-31 High mobility group box domain
ENSMUSP00000080815 SUPERFAMILY SSF47095 IPR009071 6 83 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSMUSP00000080815 PF00505 1.7e-27 HMG_box HMG (high mobility group) box
ENSMUSP00000080815 PF09011 6e-11 HMG_box_2 HMG-box domain
ENSMUSP00000080815 PF12336 5.8e-07 SOXp SOX transcription factor

Gene Ontology Annotation
Protein Entry Name Space Description
ENSMUSP00000080815 GO:0000122 biological_process negative regulation of transcription from RNA polymerase II promoter
ENSMUSP00000080815 GO:0006351 biological_process transcription, DNA-templated
ENSMUSP00000080815 GO:0045892 biological_process negative regulation of transcription, DNA-templated
ENSMUSP00000080815 GO:0005634 cellular_component nucleus
ENSMUSP00000080815 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100019887 7029 Acyrthosiphon pisum 100165687
400682 Amphimedon queenslandica 100632156 34638 Metaseiulus occidentalis 100898556
8083 Xiphophorus maculatus 102230267 7897 Latimeria chalumnae 102359787
6087 Hydra magnipapillata 100205840 9555 Papio anubis 101004306
9685 Felis catus 101099001 7227 Drosophila melanogaster 39569
7719 Ciona intestinalis ENSCING00000006005 9483 Callithrix jacchus ENSCJAG00000003296
9361 Dasypus novemcinctus ENSDNOG00000004931 9595 Gorilla gorilla ENSGGOG00000003177
59463 Myotis lucifugus ENSMLUG00000013015 8090 Oryzias latipes ENSORLG00000017755
9598 Pan troglodytes ENSPTRG00000005969 42254 Sorex araneus ENSSARG00000006102
59729 Taeniopygia guttata ENSTGUG00000011206 7070 Tribolium castaneum 660661
9544 Macaca mulatta 695074 28377 Anolis carolinensis ENSACAG00000002492
9646 Ailuropoda melanoleuca ENSAMEG00000010234 9358 Choloepus hoffmanni ENSCHOG00000012015
9365 Erinaceus europaeus ENSEEUG00000013305 69293 Gasterosteus aculeatus ENSGACG00000004124
8049 Gadus morhua ENSGMOG00000019987 9305 Sarcophilus harrisii ENSSHAG00000016704
9823 Sus scrofa ENSSSCG00000009494 43179 Ictidomys tridecemlineatus ENSSTOG00000025068