Basic Information | |||
Gene ID | ENSCJAG00000003296 | ||
Gene Name | SOX21 | ||
Full Name | Uncharacterized protein | ||
Organism | Callithrix jacchus [9483] |
Cross Reference | |||
UniProt | F7GMF1 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSCJAP00000050813 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 6 | 86 | 4.10e-42 | High mobility group box domain |
ENSCJAP00000050813 | Pfam | PF00505 | IPR009071 | 8 | 76 | 2.50e-27 | High mobility group box domain |
ENSCJAP00000050813 | Pfam | PF12336 | IPR022097 | 77 | 95 | 9.50e-06 | Transcription factor SOX |
ENSCJAP00000050813 | ProSiteProfiles | PS50118 | IPR009071 | 8 | 76 | 0.00e-00 | High mobility group box domain |
ENSCJAP00000050813 | SMART | SM00398 | IPR009071 | 7 | 77 | 2.70e-31 | High mobility group box domain |
ENSCJAP00000050813 | SUPERFAMILY | SSF47095 | IPR009071 | 6 | 83 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSCJAP00000050813 | PF00505 | 1.7e-27 | HMG_box | HMG (high mobility group) box |
ENSCJAP00000050813 | PF09011 | 5.2e-11 | HMG_box_2 | HMG-box domain |
ENSCJAP00000050813 | PF12336 | 9.5e-06 | SOXp | SOX transcription factor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSCJAP00000050813 | GO:0000122 | biological_process | negative regulation of transcription from RNA polymerase II promoter |
ENSCJAP00000050813 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSCJAP00000050813 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSCJAP00000050813 | GO:0045892 | biological_process | negative regulation of transcription, DNA-templated |
ENSCJAP00000050813 | GO:0005634 | cellular_component | nucleus |
ENSCJAP00000050813 | GO:0003677 | molecular_function | DNA binding |
ENSCJAP00000050813 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13616 | Monodelphis domestica | 100019887 | 7425 | Nasonia vitripennis | 100122865 |
10224 | Saccoglossus kowalevskii | 100303553 | 8090 | Oryzias latipes | 100304454 |
9601 | Pongo abelii | 100460230 | 61853 | Nomascus leucogenys | 100605885 |
30195 | Bombus terrestris | 100647305 | 9785 | Loxodonta africana | 100666585 |
8128 | Oreochromis niloticus | 100695210 | 132113 | Bombus impatiens | 100745146 |
7463 | Apis florea | 100872761 | 143995 | Megachile rotundata | 100879499 |
9597 | Pan paniscus | 100976706 | 39432 | Saimiri boliviensis | 101049079 |
31033 | Takifugu rubripes | 101077582 | 9669 | Mustela putorius furo | 101690298 |
8083 | Xiphophorus maculatus | 102230267 | 7897 | Latimeria chalumnae | 102359787 |
6239 | Caenorhabditis elegans | 185534 | 10090 | Mus musculus | 223227 |
10116 | Rattus norvegicus | 300954 | 7668 | Strongylocentrotus purpuratus | 373201 |
7070 | Tribolium castaneum | 660661 | 9544 | Macaca mulatta | 695074 |
7460 | Apis mellifera | 726150 | 28377 | Anolis carolinensis | ENSACAG00000002492 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000010234 | 9358 | Choloepus hoffmanni | ENSCHOG00000012015 |
9555 | Papio anubis | 101004306 | 7227 | Drosophila melanogaster | 39569 |
7955 | Danio rerio | 557661 | 9913 | Bos taurus | 614121 |
10141 | Cavia porcellus | ENSCPOG00000026272 | 9371 | Echinops telfairi | ENSETEG00000018576 |
9595 | Gorilla gorilla | ENSGGOG00000003177 | 132908 | Pteropus vampyrus | ENSPVAG00000007702 |
59729 | Taeniopygia guttata | ENSTGUG00000011206 | 51511 | Ciona savignyi | ENSCSAVG00000009067 |
69293 | Gasterosteus aculeatus | ENSGACG00000004124 | 9031 | Gallus gallus | ENSGALG00000017372 |
8049 | Gadus morhua | ENSGMOG00000019987 | 9315 | Macropus eugenii | ENSMEUG00000006246 |
30608 | Microcebus murinus | ENSMICG00000013774 | 9986 | Oryctolagus cuniculus | ENSOCUG00000021286 |
9813 | Procavia capensis | ENSPCAG00000012490 | 9598 | Pan troglodytes | ENSPTRG00000005969 |
9305 | Sarcophilus harrisii | ENSSHAG00000016704 | 9823 | Sus scrofa | ENSSSCG00000009494 |
37347 | Tupaia belangeri | ENSTBEG00000007360 | 99883 | Tetraodon nigroviridis | ENSTNIG00000006369 |
Paralogs | |||
ENSCJAG00000008401 | ENSCJAG00000032566 |