Basic Information | |||
Gene ID | ENSCING00000006005 | ||
Gene Name | soxB1 | ||
Full Name | Uncharacterized protein | ||
Organism | Ciona intestinalis [7719] |
Cross Reference | |||
UniProt | F6T302 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSCINP00000012400 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 95 | 174 | 1.30e-39 | High mobility group box domain |
ENSCINP00000012400 | Pfam | PF00505 | IPR009071 | 96 | 164 | 2.00e-26 | High mobility group box domain |
ENSCINP00000012400 | Pfam | PF12336 | IPR022097 | 165 | 212 | 1.30e-04 | Transcription factor SOX |
ENSCINP00000012400 | ProSiteProfiles | PS50118 | IPR009071 | 96 | 164 | 0.00e-00 | High mobility group box domain |
ENSCINP00000012400 | SMART | SM00398 | IPR009071 | 95 | 165 | 5.60e-31 | High mobility group box domain |
ENSCINP00000012400 | SUPERFAMILY | SSF47095 | IPR009071 | 87 | 168 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSCINP00000012400 | PF00505 | 1.1e-26 | HMG_box | HMG (high mobility group) box |
ENSCINP00000012400 | PF09011 | 8.7e-11 | HMG_box_2 | HMG-box domain |
ENSCINP00000012400 | PF12336 | 0.00013 | SOXp | SOX transcription factor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSCINP00000012400 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSCINP00000012400 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSCINP00000012400 | GO:0005634 | cellular_component | nucleus |
ENSCINP00000012400 | GO:0003677 | molecular_function | DNA binding |
ENSCINP00000012400 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13616 | Monodelphis domestica | 100019887 | 7425 | Nasonia vitripennis | 100122865 |
6087 | Hydra magnipapillata | 100211256 | 10224 | Saccoglossus kowalevskii | 100303496 |
9601 | Pongo abelii | 100460719 | 61853 | Nomascus leucogenys | 100605885 |
400682 | Amphimedon queenslandica | 100632156 | 30195 | Bombus terrestris | 100647305 |
9785 | Loxodonta africana | 100666585 | 8128 | Oreochromis niloticus | 100695175 |
132113 | Bombus impatiens | 100745146 | 10029 | Cricetulus griseus | 100759815 |
7463 | Apis florea | 100872761 | 143995 | Megachile rotundata | 100879499 |
34638 | Metaseiulus occidentalis | 100898556 | 30611 | Otolemur garnettii | 100963354 |
9597 | Pan paniscus | 100976706 | 9555 | Papio anubis | 101022620 |
39432 | Saimiri boliviensis | 101049079 | 31033 | Takifugu rubripes | 101073272 |
9685 | Felis catus | 101099001 | 8090 | Oryzias latipes | 101162114 |
8083 | Xiphophorus maculatus | 102226408 | 13735 | Pelodiscus sinensis | 102443720 |
6239 | Caenorhabditis elegans | 185534 | 10090 | Mus musculus | 223227 |
7668 | Strongylocentrotus purpuratus | 373201 | 9031 | Gallus gallus | 396105 |
8364 | Xenopus tropicalis | 407873 | 7227 | Drosophila melanogaster | 44275 |
9598 | Pan troglodytes | 460869 | 9615 | Canis familiaris | 488092 |
10116 | Rattus norvegicus | 499593 | 7070 | Tribolium castaneum | 660601 |
9606 | Homo sapiens | 6657 | 9544 | Macaca mulatta | 695074 |
7460 | Apis mellifera | 726150 | 28377 | Anolis carolinensis | ENSACAG00000002492 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000011029 | 9358 | Choloepus hoffmanni | ENSCHOG00000012015 |
7029 | Acyrthosiphon pisum | 100164548 | 7897 | Latimeria chalumnae | 102366157 |
7955 | Danio rerio | 30038 | 9913 | Bos taurus | 614121 |
10141 | Cavia porcellus | ENSCPOG00000026272 | 9595 | Gorilla gorilla | ENSGGOG00000027572 |
9978 | Ochotona princeps | ENSOPRG00000017106 | 132908 | Pteropus vampyrus | ENSPVAG00000007702 |
42254 | Sorex araneus | ENSSARG00000006102 | 9483 | Callithrix jacchus | ENSCJAG00000008401 |
51511 | Ciona savignyi | ENSCSAVG00000000494 | 9361 | Dasypus novemcinctus | ENSDNOG00000023758 |
10020 | Dipodomys ordii | ENSDORG00000007481 | 9365 | Erinaceus europaeus | ENSEEUG00000013305 |
9371 | Echinops telfairi | ENSETEG00000006366 | 69293 | Gasterosteus aculeatus | ENSGACG00000006100 |
8049 | Gadus morhua | ENSGMOG00000019777 | 9315 | Macropus eugenii | ENSMEUG00000006246 |
30608 | Microcebus murinus | ENSMICG00000013774 | 59463 | Myotis lucifugus | ENSMLUG00000013015 |
9669 | Mustela putorius furo | ENSMPUG00000011830 | 9258 | Ornithorhynchus anatinus | ENSOANG00000004458 |
9986 | Oryctolagus cuniculus | ENSOCUG00000011135 | 9813 | Procavia capensis | ENSPCAG00000012490 |
7757 | Petromyzon marinus | ENSPMAG00000009737 | 9305 | Sarcophilus harrisii | ENSSHAG00000016704 |
9823 | Sus scrofa | ENSSSCG00000011771 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000025068 |
37347 | Tupaia belangeri | ENSTBEG00000007360 | 99883 | Tetraodon nigroviridis | ENSTNIG00000003970 |
9739 | Tursiops truncatus | ENSTTRG00000004853 | 30538 | Vicugna pacos | ENSVPAG00000010334 |