Basic Information
Gene ID ENSCING00000006005
Gene Name soxB1
Full Name Uncharacterized protein
Organism Ciona intestinalis [7719]

Cross Reference
UniProt F6T302 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSCINP00000012400 Gene3D G3DSA:1.10.30.10 IPR009071 95 174 1.30e-39 High mobility group box domain
ENSCINP00000012400 Pfam PF00505 IPR009071 96 164 2.00e-26 High mobility group box domain
ENSCINP00000012400 Pfam PF12336 IPR022097 165 212 1.30e-04 Transcription factor SOX
ENSCINP00000012400 ProSiteProfiles PS50118 IPR009071 96 164 0.00e-00 High mobility group box domain
ENSCINP00000012400 SMART SM00398 IPR009071 95 165 5.60e-31 High mobility group box domain
ENSCINP00000012400 SUPERFAMILY SSF47095 IPR009071 87 168 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSCINP00000012400 PF00505 1.1e-26 HMG_box HMG (high mobility group) box
ENSCINP00000012400 PF09011 8.7e-11 HMG_box_2 HMG-box domain
ENSCINP00000012400 PF12336 0.00013 SOXp SOX transcription factor

Gene Ontology Annotation
Protein Entry Name Space Description
ENSCINP00000012400 GO:0006351 biological_process transcription, DNA-templated
ENSCINP00000012400 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSCINP00000012400 GO:0005634 cellular_component nucleus
ENSCINP00000012400 GO:0003677 molecular_function DNA binding
ENSCINP00000012400 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100019887 7425 Nasonia vitripennis 100122865
6087 Hydra magnipapillata 100211256 10224 Saccoglossus kowalevskii 100303496
9601 Pongo abelii 100460719 61853 Nomascus leucogenys 100605885
400682 Amphimedon queenslandica 100632156 30195 Bombus terrestris 100647305
9785 Loxodonta africana 100666585 8128 Oreochromis niloticus 100695175
132113 Bombus impatiens 100745146 10029 Cricetulus griseus 100759815
7463 Apis florea 100872761 143995 Megachile rotundata 100879499
34638 Metaseiulus occidentalis 100898556 30611 Otolemur garnettii 100963354
9597 Pan paniscus 100976706 9555 Papio anubis 101022620
39432 Saimiri boliviensis 101049079 31033 Takifugu rubripes 101073272
9685 Felis catus 101099001 8090 Oryzias latipes 101162114
8083 Xiphophorus maculatus 102226408 13735 Pelodiscus sinensis 102443720
6239 Caenorhabditis elegans 185534 10090 Mus musculus 223227
7668 Strongylocentrotus purpuratus 373201 9031 Gallus gallus 396105
8364 Xenopus tropicalis 407873 7227 Drosophila melanogaster 44275
9598 Pan troglodytes 460869 9615 Canis familiaris 488092
10116 Rattus norvegicus 499593 7070 Tribolium castaneum 660601
9606 Homo sapiens 6657 9544 Macaca mulatta 695074
7460 Apis mellifera 726150 28377 Anolis carolinensis ENSACAG00000002492
9646 Ailuropoda melanoleuca ENSAMEG00000011029 9358 Choloepus hoffmanni ENSCHOG00000012015
7029 Acyrthosiphon pisum 100164548 7897 Latimeria chalumnae 102366157
7955 Danio rerio 30038 9913 Bos taurus 614121
10141 Cavia porcellus ENSCPOG00000026272 9595 Gorilla gorilla ENSGGOG00000027572
9978 Ochotona princeps ENSOPRG00000017106 132908 Pteropus vampyrus ENSPVAG00000007702
42254 Sorex araneus ENSSARG00000006102 9483 Callithrix jacchus ENSCJAG00000008401
51511 Ciona savignyi ENSCSAVG00000000494 9361 Dasypus novemcinctus ENSDNOG00000023758
10020 Dipodomys ordii ENSDORG00000007481 9365 Erinaceus europaeus ENSEEUG00000013305
9371 Echinops telfairi ENSETEG00000006366 69293 Gasterosteus aculeatus ENSGACG00000006100
8049 Gadus morhua ENSGMOG00000019777 9315 Macropus eugenii ENSMEUG00000006246
30608 Microcebus murinus ENSMICG00000013774 59463 Myotis lucifugus ENSMLUG00000013015
9669 Mustela putorius furo ENSMPUG00000011830 9258 Ornithorhynchus anatinus ENSOANG00000004458
9986 Oryctolagus cuniculus ENSOCUG00000011135 9813 Procavia capensis ENSPCAG00000012490
7757 Petromyzon marinus ENSPMAG00000009737 9305 Sarcophilus harrisii ENSSHAG00000016704
9823 Sus scrofa ENSSSCG00000011771 43179 Ictidomys tridecemlineatus ENSSTOG00000025068
37347 Tupaia belangeri ENSTBEG00000007360 99883 Tetraodon nigroviridis ENSTNIG00000003970
9739 Tursiops truncatus ENSTTRG00000004853 30538 Vicugna pacos ENSVPAG00000010334