Basic Information | |||
Gene ID | 395221 | ||
Gene Name | LXR; NR1H3; RCJMB04_19n22 | ||
Full Name | Liver X receptor | ||
Organism | Gallus gallus [9031] |
Cross Reference | |||
UniProt | Q8JHU1 | UniGene | Gga.4130 |
PDB | NULL | OMIM | NULL |
KEGG | gga:395221 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSGALP00000013341 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 114 | 171 | 6.90e-86 | Nuclear hormone receptor, ligand-binding |
ENSGALP00000013341 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 211 | 408 | 6.90e-86 | Nuclear hormone receptor, ligand-binding |
ENSGALP00000013341 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 60 | 113 | 4.60e-25 | Zinc finger, NHR/GATA-type |
ENSGALP00000013341 | Pfam | PF00104 | IPR000536 | 205 | 389 | 2.00e-34 | Nuclear hormone receptor, ligand-binding, core |
ENSGALP00000013341 | Pfam | PF00105 | IPR001628 | 59 | 126 | 1.20e-27 | Zinc finger, nuclear hormone receptor-type |
ENSGALP00000013341 | PRINTS | PR00047 | IPR001628 | 109 | 117 | 2.90e-17 | Zinc finger, nuclear hormone receptor-type |
ENSGALP00000013341 | PRINTS | PR00047 | IPR001628 | 117 | 125 | 2.90e-17 | Zinc finger, nuclear hormone receptor-type |
ENSGALP00000013341 | PRINTS | PR00047 | IPR001628 | 60 | 76 | 2.90e-17 | Zinc finger, nuclear hormone receptor-type |
ENSGALP00000013341 | PRINTS | PR00047 | IPR001628 | 76 | 91 | 2.90e-17 | Zinc finger, nuclear hormone receptor-type |
ENSGALP00000013341 | PRINTS | PR00398 | IPR001723 | 121 | 131 | 1.70e-23 | Steroid hormone receptor |
ENSGALP00000013341 | PRINTS | PR00398 | IPR001723 | 222 | 243 | 1.70e-23 | Steroid hormone receptor |
ENSGALP00000013341 | PRINTS | PR00398 | IPR001723 | 243 | 259 | 1.70e-23 | Steroid hormone receptor |
ENSGALP00000013341 | PRINTS | PR00398 | IPR001723 | 311 | 326 | 1.70e-23 | Steroid hormone receptor |
ENSGALP00000013341 | PRINTS | PR00398 | IPR001723 | 368 | 385 | 1.70e-23 | Steroid hormone receptor |
ENSGALP00000013341 | PRINTS | PR02034 | IPR023257 | 276 | 291 | 9.00e-39 | Liver X receptor |
ENSGALP00000013341 | PRINTS | PR02034 | IPR023257 | 303 | 316 | 9.00e-39 | Liver X receptor |
ENSGALP00000013341 | PRINTS | PR02034 | IPR023257 | 378 | 395 | 9.00e-39 | Liver X receptor |
ENSGALP00000013341 | PRINTS | PR02034 | IPR023257 | 47 | 57 | 9.00e-39 | Liver X receptor |
ENSGALP00000013341 | PRINTS | PR02034 | IPR023257 | 95 | 109 | 9.00e-39 | Liver X receptor |
ENSGALP00000013341 | ProSitePatterns | PS00031 | IPR001628 | 60 | 86 | - | Zinc finger, nuclear hormone receptor-type |
ENSGALP00000013341 | ProSiteProfiles | PS51030 | IPR001628 | 57 | 132 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
ENSGALP00000013341 | SMART | SM00399 | IPR001628 | 57 | 128 | 5.50e-39 | Zinc finger, nuclear hormone receptor-type |
ENSGALP00000013341 | SMART | SM00430 | IPR000536 | 221 | 380 | 3.60e-46 | Nuclear hormone receptor, ligand-binding, core |
ENSGALP00000013341 | SUPERFAMILY | SSF48508 | IPR008946 | 168 | 407 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSGALP00000013341 | PF00104 | 1.3e-34 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
ENSGALP00000013341 | PF00105 | 7.3e-28 | zf-C4 | Zinc finger, C4 type (two domains) |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSGALP00000013341 | GO:0005634 | cellular_component | nucleus |
ENSGALP00000013341 | GO:0003677 | molecular_function | DNA binding |
ENSGALP00000013341 | GO:0003707 | molecular_function | steroid hormone receptor activity |
ENSGALP00000013341 | GO:0008270 | molecular_function | zinc ion binding |
ENSGALP00000013341 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100052399 | 7029 | Acyrthosiphon pisum | 100160393 |
10224 | Saccoglossus kowalevskii | 100313647 | 9601 | Pongo abelii | 100453246 |
9646 | Ailuropoda melanoleuca | 100474551 | 28377 | Anolis carolinensis | 100567692 |
61853 | Nomascus leucogenys | 100605954 | 30195 | Bombus terrestris | 100646757 |
9785 | Loxodonta africana | 100673961 | 132113 | Bombus impatiens | 100749603 |
10029 | Cricetulus griseus | 100756988 | 7463 | Apis florea | 100872217 |
143995 | Megachile rotundata | 100883359 | 34638 | Metaseiulus occidentalis | 100908536 |
39432 | Saimiri boliviensis | 101027381 | 9595 | Gorilla gorilla | 101126697 |
9669 | Mustela putorius furo | 101692562 | 8083 | Xiphophorus maculatus | 102221658 |
7897 | Latimeria chalumnae | 102366585 | 13735 | Pelodiscus sinensis | 102462146 |
7227 | Drosophila melanogaster | 35540 | 7425 | Nasonia vitripennis | 100119033 |
8128 | Oreochromis niloticus | 100702741 | 9597 | Pan paniscus | 100971327 |
9555 | Papio anubis | 100997292 | 43179 | Ictidomys tridecemlineatus | 101976065 |
10090 | Mus musculus | 22259 | 7668 | Strongylocentrotus purpuratus | 574588 |
9615 | Canis familiaris | ENSCAFG00000008824 | 9483 | Callithrix jacchus | ENSCJAG00000004439 |
10141 | Cavia porcellus | ENSCPOG00000013362 | 59463 | Myotis lucifugus | ENSMLUG00000017646 |
9813 | Procavia capensis | ENSPCAG00000016194 | 9598 | Pan troglodytes | ENSPTRG00000003560 |
42254 | Sorex araneus | ENSSARG00000002403 | 9305 | Sarcophilus harrisii | ENSSHAG00000017152 |
37347 | Tupaia belangeri | ENSTBEG00000000492 | 9823 | Sus scrofa | 397553 |
7460 | Apis mellifera | 406084 | 10116 | Rattus norvegicus | 58852 |
7070 | Tribolium castaneum | 657515 | 9913 | Bos taurus | ENSBTAG00000003264 |
9358 | Choloepus hoffmanni | ENSCHOG00000001621 | 7719 | Ciona intestinalis | ENSCING00000007203 |
9361 | Dasypus novemcinctus | ENSDNOG00000011206 | 10020 | Dipodomys ordii | ENSDORG00000007747 |
9365 | Erinaceus europaeus | ENSEEUG00000003283 | 9371 | Echinops telfairi | ENSETEG00000000415 |
9685 | Felis catus | ENSFCAG00000002528 | 69293 | Gasterosteus aculeatus | ENSGACG00000017167 |
8049 | Gadus morhua | ENSGMOG00000005399 | 9315 | Macropus eugenii | ENSMEUG00000002853 |
30608 | Microcebus murinus | ENSMICG00000007066 | 13616 | Monodelphis domestica | ENSMODG00000019906 |
9986 | Oryctolagus cuniculus | ENSOCUG00000002095 | 30611 | Otolemur garnettii | ENSOGAG00000012593 |
9978 | Ochotona princeps | ENSOPRG00000009497 | 8090 | Oryzias latipes | ENSORLG00000001286 |
132908 | Pteropus vampyrus | ENSPVAG00000007321 | 59729 | Taeniopygia guttata | ENSTGUG00000016341 |
99883 | Tetraodon nigroviridis | ENSTNIG00000009590 | 31033 | Takifugu rubripes | ENSTRUG00000016403 |
9478 | Tarsius syrichta | ENSTSYG00000001532 | 9739 | Tursiops truncatus | ENSTTRG00000014149 |
30538 | Vicugna pacos | ENSVPAG00000011840 |