Basic Information
Gene ID 6656 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name SOX1
Full Name Transcription factor SOX-1
Organism Homo sapiens [9606]

Cross Reference
UniProt O00570 UniGene Hs.202526
PDB NULL OMIM 602148
KEGG hsa:6656 UCSC uc001vsb.1

Protein Interactions
DIP NULL
IntAct O00570
MINT NULL
STRING 9606.ENSP00000330218

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSP00000330218 Gene3D G3DSA:1.10.30.10 IPR009071 50 129 3.40e-40 High mobility group box domain
ENSP00000330218 Pfam PF00505 IPR009071 51 119 2.80e-26 High mobility group box domain
ENSP00000330218 Pfam PF12336 IPR022097 120 224 3.90e-13 Transcription factor SOX
ENSP00000330218 ProSiteProfiles PS50118 IPR009071 51 119 0.00e-00 High mobility group box domain
ENSP00000330218 SMART SM00398 IPR009071 50 120 5.00e-30 High mobility group box domain
ENSP00000330218 SUPERFAMILY SSF47095 IPR009071 43 123 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSP00000330218 PF00505 1.8e-26 HMG_box HMG (high mobility group) box
ENSP00000330218 PF12336 2.8e-16 SOXp SOX transcription factor
ENSP00000330218 PF09011 6e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSP00000330218 GO:0006351 biological_process transcription, DNA-templated
ENSP00000330218 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSP00000330218 GO:0005634 cellular_component nucleus
ENSP00000330218 GO:0003677 molecular_function DNA binding
ENSP00000330218 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9986 Oryctolagus cuniculus 100349813 8128 Oreochromis niloticus 100691128
8083 Xiphophorus maculatus 102225865 7897 Latimeria chalumnae 102353566
7955 Danio rerio 436756 9913 Bos taurus 618135
69293 Gasterosteus aculeatus ENSGACG00000002889 8364 Xenopus tropicalis ENSXETG00000001902
28377 Anolis carolinensis ENSACAG00000006346 9615 Canis familiaris ENSCAFG00000006137
9361 Dasypus novemcinctus ENSDNOG00000023758 8049 Gadus morhua ENSGMOG00000020606
9315 Macropus eugenii ENSMEUG00000016617 30611 Otolemur garnettii ENSOGAG00000034416
8090 Oryzias latipes ENSORLG00000012110 9601 Pongo abelii ENSPPYG00000005512
99883 Tetraodon nigroviridis ENSTNIG00000013867