Basic Information
Gene ID ENSXETG00000001902
Gene Name sox1
Full Name Transcription factor Sox-1
Organism Xenopus tropicalis [8364]

Cross Reference
UniProt F6YJE5 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSXETP00000004030 Gene3D G3DSA:1.10.30.10 IPR009071 36 115 2.90e-40 High mobility group box domain
ENSXETP00000004030 Pfam PF00505 IPR009071 37 105 2.40e-26 High mobility group box domain
ENSXETP00000004030 Pfam PF12336 IPR022097 106 215 1.30e-10 Transcription factor SOX
ENSXETP00000004030 ProSiteProfiles PS50118 IPR009071 37 105 0.00e-00 High mobility group box domain
ENSXETP00000004030 SMART SM00398 IPR009071 36 106 5.00e-30 High mobility group box domain
ENSXETP00000004030 SUPERFAMILY SSF47095 IPR009071 31 109 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSXETP00000004030 PF00505 1.5e-26 HMG_box HMG (high mobility group) box
ENSXETP00000004030 PF12336 4.1e-12 SOXp SOX transcription factor
ENSXETP00000004030 PF09011 4.5e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSXETP00000004030 GO:0006351 biological_process transcription, DNA-templated
ENSXETP00000004030 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSXETP00000004030 GO:0005634 cellular_component nucleus
ENSXETP00000004030 GO:0003677 molecular_function DNA binding
ENSXETP00000004030 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9986 Oryctolagus cuniculus 100349813 8128 Oreochromis niloticus 100691128
8083 Xiphophorus maculatus 102225865 7897 Latimeria chalumnae 102353566
7955 Danio rerio 436756 9913 Bos taurus 618135
9606 Homo sapiens 6656 28377 Anolis carolinensis ENSACAG00000006346
9615 Canis familiaris ENSCAFG00000006137 9361 Dasypus novemcinctus ENSDNOG00000023758
69293 Gasterosteus aculeatus ENSGACG00000002889 8049 Gadus morhua ENSGMOG00000020606
9315 Macropus eugenii ENSMEUG00000016617 30611 Otolemur garnettii ENSOGAG00000034416
8090 Oryzias latipes ENSORLG00000012110 9601 Pongo abelii ENSPPYG00000005512
99883 Tetraodon nigroviridis ENSTNIG00000013867