Basic Information
Gene ID ENSORLG00000012110
Gene Name sox1a
Full Name Uncharacterized protein
Organism Oryzias latipes [8090]

Cross Reference
UniProt H2M9H2 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSORLP00000015156 Gene3D G3DSA:1.10.30.10 IPR009071 35 115 2.20e-40 High mobility group box domain
ENSORLP00000015156 Pfam PF00505 IPR009071 37 105 2.00e-26 High mobility group box domain
ENSORLP00000015156 Pfam PF12336 IPR022097 106 218 4.20e-10 Transcription factor SOX
ENSORLP00000015156 ProSiteProfiles PS50118 IPR009071 37 105 0.00e-00 High mobility group box domain
ENSORLP00000015156 SMART SM00398 IPR009071 36 106 6.80e-30 High mobility group box domain
ENSORLP00000015156 SUPERFAMILY SSF47095 IPR009071 27 109 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSORLP00000015156 PF00505 1.2e-26 HMG_box HMG (high mobility group) box
ENSORLP00000015156 PF12336 7.1e-12 SOXp SOX transcription factor
ENSORLP00000015156 PF09011 6.8e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSORLP00000015156 GO:0006351 biological_process transcription, DNA-templated
ENSORLP00000015156 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSORLP00000015156 GO:0005634 cellular_component nucleus
ENSORLP00000015156 GO:0003677 molecular_function DNA binding
ENSORLP00000015156 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9986 Oryctolagus cuniculus 100349813 400682 Amphimedon queenslandica 100632156
8083 Xiphophorus maculatus 102225865 28377 Anolis carolinensis ENSACAG00000006346
9615 Canis familiaris ENSCAFG00000006137 9361 Dasypus novemcinctus ENSDNOG00000023758
8128 Oreochromis niloticus 100691128 7897 Latimeria chalumnae 102353566
7955 Danio rerio 436756 9913 Bos taurus 618135
9606 Homo sapiens 6656 69293 Gasterosteus aculeatus ENSGACG00000002889
8049 Gadus morhua ENSGMOG00000020606 9315 Macropus eugenii ENSMEUG00000016617
30611 Otolemur garnettii ENSOGAG00000034416 9601 Pongo abelii ENSPPYG00000005512
8364 Xenopus tropicalis ENSXETG00000001902 99883 Tetraodon nigroviridis ENSTNIG00000013867

Paralogs
100304454