Basic Information
Gene ID 81736 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Nfkb1
Full Name Nuclear factor NF-kappa-B p105 subunit
Organism Rattus norvegicus [10116]

Cross Reference
UniProt F1LQH2 UniGene Rn.2411
PDB NULL OMIM NULL
KEGG rno:81736 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000028944 Gene3D G3DSA:1.10.533.10 IPR011029 801 889 8.10e-24 Death-like domain
ENSRNOP00000028944 Gene3D G3DSA:1.25.40.20 IPR020683 513 785 1.20e-54 Ankyrin repeat-containing domain
ENSRNOP00000028944 Gene3D G3DSA:2.60.40.10 IPR013783 245 363 1.40e-52 Immunoglobulin-like fold
ENSRNOP00000028944 Gene3D G3DSA:2.60.40.340 IPR011539 39 241 2.80e-72 Rel homology domain
ENSRNOP00000028944 Pfam PF00531 IPR000488 815 887 6.40e-10 Death domain
ENSRNOP00000028944 Pfam PF00554 IPR011539 42 240 4.90e-73 Rel homology domain
ENSRNOP00000028944 Pfam PF12796 IPR020683 544 634 1.30e-11 Ankyrin repeat-containing domain
ENSRNOP00000028944 Pfam PF12796 IPR020683 652 746 5.00e-15 Ankyrin repeat-containing domain
ENSRNOP00000028944 PRINTS PR00057 IPR000451 229 243 1.90e-44 NF-kappa-B/Rel/Dorsal
ENSRNOP00000028944 PRINTS PR00057 IPR000451 262 282 1.90e-44 NF-kappa-B/Rel/Dorsal
ENSRNOP00000028944 PRINTS PR00057 IPR000451 298 316 1.90e-44 NF-kappa-B/Rel/Dorsal
ENSRNOP00000028944 PRINTS PR00057 IPR000451 339 353 1.90e-44 NF-kappa-B/Rel/Dorsal
ENSRNOP00000028944 PRINTS PR00057 IPR000451 46 63 1.90e-44 NF-kappa-B/Rel/Dorsal
ENSRNOP00000028944 PRINTS PR01415 IPR002110 612 627 5.00e-05 Ankyrin repeat
ENSRNOP00000028944 PRINTS PR01415 IPR002110 663 677 5.00e-05 Ankyrin repeat
ENSRNOP00000028944 ProSitePatterns PS01204 IPR000451 55 61 - NF-kappa-B/Rel/Dorsal
ENSRNOP00000028944 ProSiteProfiles PS50088 IPR002110 578 610 0.00e-00 Ankyrin repeat
ENSRNOP00000028944 ProSiteProfiles PS50088 IPR002110 647 679 0.00e-00 Ankyrin repeat
ENSRNOP00000028944 ProSiteProfiles PS50088 IPR002110 681 714 0.00e-00 Ankyrin repeat
ENSRNOP00000028944 ProSiteProfiles PS50088 IPR002110 715 747 0.00e-00 Ankyrin repeat
ENSRNOP00000028944 ProSiteProfiles PS50254 IPR011539 37 244 0.00e-00 Rel homology domain
ENSRNOP00000028944 ProSiteProfiles PS50297 IPR020683 539 747 0.00e-00 Ankyrin repeat-containing domain
ENSRNOP00000028944 SMART SM00005 IPR000488 802 889 3.80e-21 Death domain
ENSRNOP00000028944 SMART SM00248 IPR002110 539 569 1.20e-02 Ankyrin repeat
ENSRNOP00000028944 SMART SM00248 IPR002110 578 607 5.50e-05 Ankyrin repeat
ENSRNOP00000028944 SMART SM00248 IPR002110 611 641 3.50e-02 Ankyrin repeat
ENSRNOP00000028944 SMART SM00248 IPR002110 647 676 1.70e-06 Ankyrin repeat
ENSRNOP00000028944 SMART SM00248 IPR002110 681 710 9.20e-04 Ankyrin repeat
ENSRNOP00000028944 SMART SM00248 IPR002110 715 744 1.10e-03 Ankyrin repeat
ENSRNOP00000028944 SMART SM00429 IPR002909 247 348 2.90e-25 IPT domain
ENSRNOP00000028944 SUPERFAMILY SSF47986 IPR011029 805 886 0.00e-00 Death-like domain
ENSRNOP00000028944 SUPERFAMILY SSF48403 IPR020683 539 757 0.00e-00 Ankyrin repeat-containing domain
ENSRNOP00000028944 SUPERFAMILY SSF49417 IPR008967 39 250 0.00e-00 p53-like transcription factor, DNA-binding
ENSRNOP00000028944 SUPERFAMILY SSF81296 IPR014756 246 378 0.00e-00 Immunoglobulin E-set

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000028944 PF00554 0 RHD Rel homology domain (RHD)
ENSRNOP00000028944 PF12796 0 Ank_2 Ankyrin repeats (3 copies)
ENSRNOP00000028944 PF00023 3.9e-34 Ank Ankyrin repeat
ENSRNOP00000028944 PF13637 1.5e-25 Ank_4 Ankyrin repeats (many copies)
ENSRNOP00000028944 PF13857 5.4e-21 Ank_5 Ankyrin repeats (many copies)
ENSRNOP00000028944 PF13606 2.3e-20 Ank_3 Ankyrin repeat
ENSRNOP00000028944 PF00531 1.8e-10 Death Death domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000028944 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000028944 GO:0005634 cellular_component nucleus
ENSRNOP00000028944 GO:0005737 cellular_component cytoplasm
ENSRNOP00000028944 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
39432 Saimiri boliviensis 101035787 7668 Strongylocentrotus purpuratus 373533
9606 Homo sapiens 4790 10224 Saccoglossus kowalevskii 100303565
61853 Nomascus leucogenys 100581655 400682 Amphimedon queenslandica 100616089
9597 Pan paniscus 100979341 9555 Papio anubis 101026781
43179 Ictidomys tridecemlineatus 101972573 59463 Myotis lucifugus 102435748
9544 Macaca mulatta 710324 9646 Ailuropoda melanoleuca ENSAMEG00000008882
9913 Bos taurus ENSBTAG00000020270 9615 Canis familiaris ENSCAFG00000010730
9358 Choloepus hoffmanni ENSCHOG00000010814 7719 Ciona intestinalis ENSCING00000006933
10141 Cavia porcellus ENSCPOG00000007789 51511 Ciona savignyi ENSCSAVG00000003063
9361 Dasypus novemcinctus ENSDNOG00000006855 10020 Dipodomys ordii ENSDORG00000007447
9796 Equus caballus ENSECAG00000015042 9371 Echinops telfairi ENSETEG00000007738
9685 Felis catus ENSFCAG00000007557 69293 Gasterosteus aculeatus ENSGACG00000001323
9595 Gorilla gorilla ENSGGOG00000009071 8049 Gadus morhua ENSGMOG00000007506
7897 Latimeria chalumnae ENSLACG00000002751 9785 Loxodonta africana ENSLAFG00000009344
9315 Macropus eugenii ENSMEUG00000001334 9103 Meleagris gallopavo ENSMGAG00000011299
9669 Mustela putorius furo ENSMPUG00000009413 9258 Ornithorhynchus anatinus ENSOANG00000022123
9986 Oryctolagus cuniculus ENSOCUG00000021712 8128 Oreochromis niloticus ENSONIG00000004349
9978 Ochotona princeps ENSOPRG00000005212 8090 Oryzias latipes ENSORLG00000002942
9813 Procavia capensis ENSPCAG00000008172 7757 Petromyzon marinus ENSPMAG00000006461
9601 Pongo abelii ENSPPYG00000014965 13735 Pelodiscus sinensis ENSPSIG00000008515
132908 Pteropus vampyrus ENSPVAG00000002722 37347 Tupaia belangeri ENSTBEG00000003520
59729 Taeniopygia guttata ENSTGUG00000003595 99883 Tetraodon nigroviridis ENSTNIG00000013359
31033 Takifugu rubripes ENSTRUG00000004360 9478 Tarsius syrichta ENSTSYG00000004853
9739 Tursiops truncatus ENSTTRG00000010852 30538 Vicugna pacos ENSVPAG00000000280
8364 Xenopus tropicalis ENSXETG00000021325 30608 Microcebus murinus ENSMICG00000014491
13616 Monodelphis domestica ENSMODG00000020672 9305 Sarcophilus harrisii ENSSHAG00000007374
8083 Xiphophorus maculatus ENSXMAG00000015369