Basic Information
Gene ID 185534
Gene Name sox-3; CELE_F40E10.2, F40E10.2
Full Name Protein SOX-3
Organism Caenorhabditis elegans [6239]

Cross Reference
UniProt Q20201 UniGene Cel.1041
PDB NULL OMIM NULL
KEGG cel:CELE_F40E10.2 UCSC F40E10.2

Protein Interactions
DIP NULL
IntAct Q20201
MINT NULL
STRING 6239.F40E10.2

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
F40E10.2 Gene3D G3DSA:1.10.30.10 IPR009071 46 126 1.30e-41 High mobility group box domain
F40E10.2 Pfam PF00505 IPR009071 48 116 4.00e-27 High mobility group box domain
F40E10.2 ProSiteProfiles PS50118 IPR009071 48 116 0.00e-00 High mobility group box domain
F40E10.2 SMART SM00398 IPR009071 47 117 1.00e-30 High mobility group box domain
F40E10.2 SUPERFAMILY SSF47095 IPR009071 44 120 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
F40E10.2 PF00505 1.6e-27 HMG_box HMG (high mobility group) box
F40E10.2 PF09011 8e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
F40E10.2 GO:0000122 biological_process negative regulation of transcription from RNA polymerase II promoter
F40E10.2 GO:0006351 biological_process transcription, DNA-templated
F40E10.2 GO:0045892 biological_process negative regulation of transcription, DNA-templated
F40E10.2 GO:0005634 cellular_component nucleus
F40E10.2 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100016847 7425 Nasonia vitripennis 100122865
7029 Acyrthosiphon pisum 100165687 6087 Hydra magnipapillata 100211256
10224 Saccoglossus kowalevskii 100303553 8090 Oryzias latipes 100304454
9601 Pongo abelii 100460230 61853 Nomascus leucogenys 100605885
400682 Amphimedon queenslandica 100632156 30195 Bombus terrestris 100647305
9785 Loxodonta africana 100666585 8128 Oreochromis niloticus 100695210
132113 Bombus impatiens 100745146 10029 Cricetulus griseus 100759815
7463 Apis florea 100872761 143995 Megachile rotundata 100879499
34638 Metaseiulus occidentalis 100898556 9597 Pan paniscus 100976706
39432 Saimiri boliviensis 101049079 31033 Takifugu rubripes 101077582
9685 Felis catus 101099001 9595 Gorilla gorilla 101141972
9669 Mustela putorius furo 101690298 8083 Xiphophorus maculatus 102222750
7897 Latimeria chalumnae 102348252 13735 Pelodiscus sinensis 102443720
30611 Otolemur garnettii 100963354 9555 Papio anubis 101015311
7227 Drosophila melanogaster 39567 7955 Danio rerio 557661
9913 Bos taurus 614121 9544 Macaca mulatta 716702
7719 Ciona intestinalis ENSCING00000006005 9483 Callithrix jacchus ENSCJAG00000003296
10141 Cavia porcellus ENSCPOG00000026272 9796 Equus caballus ENSECAG00000022037
9371 Echinops telfairi ENSETEG00000018576 30608 Microcebus murinus ENSMICG00000013774
9258 Ornithorhynchus anatinus ENSOANG00000004458 9978 Ochotona princeps ENSOPRG00000017106
132908 Pteropus vampyrus ENSPVAG00000007702 42254 Sorex araneus ENSSARG00000006102
10090 Mus musculus 20669 10116 Rattus norvegicus 300954
7668 Strongylocentrotus purpuratus 373201 9031 Gallus gallus 396105
8364 Xenopus tropicalis 407873 9598 Pan troglodytes 460869
9615 Canis familiaris 488092 7070 Tribolium castaneum 660601
9606 Homo sapiens 6657 7460 Apis mellifera 726150
28377 Anolis carolinensis ENSACAG00000002492 9646 Ailuropoda melanoleuca ENSAMEG00000010234
9358 Choloepus hoffmanni ENSCHOG00000012015 51511 Ciona savignyi ENSCSAVG00000009067
9361 Dasypus novemcinctus ENSDNOG00000023758 10020 Dipodomys ordii ENSDORG00000007481
9365 Erinaceus europaeus ENSEEUG00000013305 69293 Gasterosteus aculeatus ENSGACG00000004124
8049 Gadus morhua ENSGMOG00000000863 9315 Macropus eugenii ENSMEUG00000006246
9103 Meleagris gallopavo ENSMGAG00000006638 59463 Myotis lucifugus ENSMLUG00000013015
9986 Oryctolagus cuniculus ENSOCUG00000011135 9813 Procavia capensis ENSPCAG00000012490
7757 Petromyzon marinus ENSPMAG00000009737 9305 Sarcophilus harrisii ENSSHAG00000012781
9823 Sus scrofa ENSSSCG00000011656 43179 Ictidomys tridecemlineatus ENSSTOG00000025068
37347 Tupaia belangeri ENSTBEG00000007360 59729 Taeniopygia guttata ENSTGUG00000012987
99883 Tetraodon nigroviridis ENSTNIG00000006369 9739 Tursiops truncatus ENSTTRG00000004853
30538 Vicugna pacos ENSVPAG00000010334