Basic Information | |||
Gene ID | ENSDARG00000019306 | ||
Gene Name | lmx1ba; lmx1b.2 | ||
Full Name | Uncharacterized protein | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | F1RCV4 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSDARP00000112221 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 177 | 244 | 5.30e-24 | Homeodomain-like |
ENSDARP00000112221 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 29 | 95 | 5.70e-18 | Zinc finger, LIM-type |
ENSDARP00000112221 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 96 | 148 | 5.00e-15 | Zinc finger, LIM-type |
ENSDARP00000112221 | Pfam | PF00046 | IPR001356 | 193 | 249 | 1.40e-17 | Homeobox domain |
ENSDARP00000112221 | Pfam | PF00412 | IPR001781 | 33 | 88 | 1.00e-16 | Zinc finger, LIM-type |
ENSDARP00000112221 | Pfam | PF00412 | IPR001781 | 92 | 149 | 1.80e-16 | Zinc finger, LIM-type |
ENSDARP00000112221 | ProSitePatterns | PS00027 | IPR017970 | 225 | 248 | - | Homeobox, conserved site |
ENSDARP00000112221 | ProSitePatterns | PS00478 | IPR001781 | 33 | 67 | - | Zinc finger, LIM-type |
ENSDARP00000112221 | ProSitePatterns | PS00478 | IPR001781 | 92 | 127 | - | Zinc finger, LIM-type |
ENSDARP00000112221 | ProSiteProfiles | PS50023 | IPR001781 | 31 | 90 | 0.00e-00 | Zinc finger, LIM-type |
ENSDARP00000112221 | ProSiteProfiles | PS50023 | IPR001781 | 91 | 152 | 0.00e-00 | Zinc finger, LIM-type |
ENSDARP00000112221 | ProSiteProfiles | PS50071 | IPR001356 | 190 | 250 | 0.00e-00 | Homeobox domain |
ENSDARP00000112221 | SMART | SM00132 | IPR001781 | 32 | 83 | 1.40e-19 | Zinc finger, LIM-type |
ENSDARP00000112221 | SMART | SM00132 | IPR001781 | 91 | 145 | 2.70e-19 | Zinc finger, LIM-type |
ENSDARP00000112221 | SMART | SM00389 | IPR001356 | 192 | 254 | 1.00e-23 | Homeobox domain |
ENSDARP00000112221 | SUPERFAMILY | SSF46689 | IPR009057 | 184 | 250 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSDARP00000112221 | PF00412 | 1.5e-33 | LIM | LIM domain |
ENSDARP00000112221 | PF00046 | 6.8e-18 | Homeobox | Homeobox domain |
ENSDARP00000112221 | PF05920 | 0.00011 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSDARP00000112221 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSDARP00000112221 | GO:0007275 | biological_process | multicellular organismal development |
ENSDARP00000112221 | GO:0005634 | cellular_component | nucleus |
ENSDARP00000112221 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSDARP00000112221 | GO:0008270 | molecular_function | zinc ion binding |
ENSDARP00000112221 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10224 | Saccoglossus kowalevskii | 100328994 | 34638 | Metaseiulus occidentalis | 100909136 |
7227 | Drosophila melanogaster | 39406 | 7897 | Latimeria chalumnae | ENSLACG00000015722 |
9371 | Echinops telfairi | ENSETEG00000019757 | 9258 | Ornithorhynchus anatinus | ENSOANG00000022733 |
Paralogs | |||
554360 |