Basic Information
Gene ID ENSRNOG00000017198 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Hif3a
Full Name Hypoxia-inducible factor 3-alpha
Organism Rattus norvegicus [10116]

Cross Reference
UniProt F1LRL5 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000023490 Pfam PF00989 IPR013767 90 144 8.40e-07 PAS fold
ENSRNOP00000023490 Pfam PF11413 IPR021537 473 504 1.40e-15 Hypoxia-inducible factor, alpha subunit
ENSRNOP00000023490 ProSiteProfiles PS50112 IPR000014 244 295 0.00e-00 PAS domain
ENSRNOP00000023490 ProSiteProfiles PS50112 IPR000014 88 143 0.00e-00 PAS domain
ENSRNOP00000023490 ProSiteProfiles PS50888 IPR011598 12 65 0.00e-00 Myc-type, basic helix-loop-helix (bHLH) domain
ENSRNOP00000023490 SMART SM00086 IPR001610 299 342 8.70e-05 PAC motif
ENSRNOP00000023490 SMART SM00091 IPR000014 225 293 1.00e-05 PAS domain
ENSRNOP00000023490 SMART SM00091 IPR000014 82 148 5.20e-12 PAS domain
ENSRNOP00000023490 SMART SM00353 IPR011598 18 73 5.40e-10 Myc-type, basic helix-loop-helix (bHLH) domain
ENSRNOP00000023490 SUPERFAMILY SSF47459 IPR011598 12 68 0.00e-00 Myc-type, basic helix-loop-helix (bHLH) domain
ENSRNOP00000023490 SUPERFAMILY SSF55785 IPR000014 239 339 0.00e-00 PAS domain
ENSRNOP00000023490 SUPERFAMILY SSF55785 IPR000014 91 144 0.00e-00 PAS domain
ENSRNOP00000023490 TIGRFAM TIGR00229 IPR000014 246 322 9.10e-06 PAS domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000023490 PF14598 6.5e-21 PAS_11 PAS domain
ENSRNOP00000023490 PF08447 7.6e-21 PAS_3 PAS fold
ENSRNOP00000023490 PF11413 7.4e-16 HIF-1 Hypoxia-inducible factor-1
ENSRNOP00000023490 PF00989 2.1e-15 PAS PAS fold
ENSRNOP00000023490 PF13426 5e-09 PAS_9 PAS domain
ENSRNOP00000023490 PF08448 2.5e-08 PAS_4 PAS fold

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000023490 GO:0001666 biological_process response to hypoxia
ENSRNOP00000023490 GO:0045893 biological_process positive regulation of transcription, DNA-templated
ENSRNOP00000023490 GO:0071456 biological_process cellular response to hypoxia
ENSRNOP00000023490 GO:0005634 cellular_component nucleus
ENSRNOP00000023490 GO:0005737 cellular_component cytoplasm
ENSRNOP00000023490 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSRNOP00000023490 GO:0004871 molecular_function signal transducer activity
ENSRNOP00000023490 GO:0035035 molecular_function histone acetyltransferase binding
ENSRNOP00000023490 GO:0046983 molecular_function protein dimerization activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
61853 Nomascus leucogenys 100582446 9597 Pan paniscus 100979253
9595 Gorilla gorilla 101146641 9598 Pan troglodytes 456149
28377 Anolis carolinensis ENSACAG00000016766 9796 Equus caballus ENSECAG00000020693
9785 Loxodonta africana ENSLAFG00000017230 9315 Macropus eugenii ENSMEUG00000002474
30611 Otolemur garnettii ENSOGAG00000008187 9978 Ochotona princeps ENSOPRG00000014480
132908 Pteropus vampyrus ENSPVAG00000003553 9555 Papio anubis 101007659
39432 Saimiri boliviensis 101027930 43179 Ictidomys tridecemlineatus 101976940
10090 Mus musculus 53417 9606 Homo sapiens 64344
9646 Ailuropoda melanoleuca ENSAMEG00000008615 10141 Cavia porcellus ENSCPOG00000024199
10020 Dipodomys ordii ENSDORG00000004664 9365 Erinaceus europaeus ENSEEUG00000009703
9685 Felis catus ENSFCAG00000014181 59463 Myotis lucifugus ENSMLUG00000014423
9669 Mustela putorius furo ENSMPUG00000005285 9813 Procavia capensis ENSPCAG00000006067
9601 Pongo abelii ENSPPYG00000010147 9823 Sus scrofa ENSSSCG00000003101
37347 Tupaia belangeri ENSTBEG00000002129 99883 Tetraodon nigroviridis ENSTNIG00000006798
9478 Tarsius syrichta ENSTSYG00000009179 9305 Sarcophilus harrisii ENSSHAG00000004128
9739 Tursiops truncatus ENSTTRG00000001609 8083 Xiphophorus maculatus ENSXMAG00000003186