Basic Information | |||
Gene ID | ENSXMAG00000017035 | ||
Gene Name | RARB (2 of 2) | ||
Full Name | Uncharacterized protein | ||
Organism | Xiphophorus maculatus [8083] |
Cross Reference | |||
UniProt | M4ARK2 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSXMAP00000017097 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 162 | 418 | 1.80e-89 | Nuclear hormone receptor, ligand-binding |
ENSXMAP00000017097 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 87 | 161 | 2.20e-33 | Zinc finger, NHR/GATA-type |
ENSXMAP00000017097 | Pfam | PF00104 | IPR000536 | 227 | 396 | 2.10e-30 | Nuclear hormone receptor, ligand-binding, core |
ENSXMAP00000017097 | Pfam | PF00105 | IPR001628 | 89 | 157 | 2.00e-32 | Zinc finger, nuclear hormone receptor-type |
ENSXMAP00000017097 | PRINTS | PR00047 | IPR001628 | 106 | 121 | 8.60e-19 | Zinc finger, nuclear hormone receptor-type |
ENSXMAP00000017097 | PRINTS | PR00047 | IPR001628 | 139 | 147 | 8.60e-19 | Zinc finger, nuclear hormone receptor-type |
ENSXMAP00000017097 | PRINTS | PR00047 | IPR001628 | 147 | 155 | 8.60e-19 | Zinc finger, nuclear hormone receptor-type |
ENSXMAP00000017097 | PRINTS | PR00047 | IPR001628 | 90 | 106 | 8.60e-19 | Zinc finger, nuclear hormone receptor-type |
ENSXMAP00000017097 | PRINTS | PR00398 | IPR001723 | 151 | 161 | 7.30e-34 | Steroid hormone receptor |
ENSXMAP00000017097 | PRINTS | PR00398 | IPR001723 | 233 | 254 | 7.30e-34 | Steroid hormone receptor |
ENSXMAP00000017097 | PRINTS | PR00398 | IPR001723 | 254 | 270 | 7.30e-34 | Steroid hormone receptor |
ENSXMAP00000017097 | PRINTS | PR00398 | IPR001723 | 321 | 336 | 7.30e-34 | Steroid hormone receptor |
ENSXMAP00000017097 | PRINTS | PR00398 | IPR001723 | 378 | 395 | 7.30e-34 | Steroid hormone receptor |
ENSXMAP00000017097 | PRINTS | PR01292 | IPR003078 | 156 | 169 | 2.40e-101 | Retinoic acid receptor |
ENSXMAP00000017097 | PRINTS | PR01292 | IPR003078 | 178 | 202 | 2.40e-101 | Retinoic acid receptor |
ENSXMAP00000017097 | PRINTS | PR01292 | IPR003078 | 203 | 219 | 2.40e-101 | Retinoic acid receptor |
ENSXMAP00000017097 | PRINTS | PR01292 | IPR003078 | 225 | 242 | 2.40e-101 | Retinoic acid receptor |
ENSXMAP00000017097 | PRINTS | PR01292 | IPR003078 | 276 | 300 | 2.40e-101 | Retinoic acid receptor |
ENSXMAP00000017097 | PRINTS | PR01292 | IPR003078 | 313 | 325 | 2.40e-101 | Retinoic acid receptor |
ENSXMAP00000017097 | PRINTS | PR01292 | IPR003078 | 343 | 364 | 2.40e-101 | Retinoic acid receptor |
ENSXMAP00000017097 | PRINTS | PR01292 | IPR003078 | 387 | 402 | 2.40e-101 | Retinoic acid receptor |
ENSXMAP00000017097 | PRINTS | PR01292 | IPR003078 | 410 | 423 | 2.40e-101 | Retinoic acid receptor |
ENSXMAP00000017097 | PRINTS | PR01292 | IPR003078 | 62 | 79 | 2.40e-101 | Retinoic acid receptor |
ENSXMAP00000017097 | ProSitePatterns | PS00031 | IPR001628 | 90 | 116 | - | Zinc finger, nuclear hormone receptor-type |
ENSXMAP00000017097 | ProSiteProfiles | PS51030 | IPR001628 | 87 | 162 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
ENSXMAP00000017097 | SMART | SM00399 | IPR001628 | 87 | 158 | 5.90e-42 | Zinc finger, nuclear hormone receptor-type |
ENSXMAP00000017097 | SMART | SM00430 | IPR000536 | 232 | 390 | 7.70e-35 | Nuclear hormone receptor, ligand-binding, core |
ENSXMAP00000017097 | SUPERFAMILY | SSF48508 | IPR008946 | 139 | 417 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSXMAP00000017097 | PF00105 | 1.2e-32 | zf-C4 | Zinc finger, C4 type (two domains) |
ENSXMAP00000017097 | PF00104 | 1e-30 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSXMAP00000017097 | GO:0005634 | cellular_component | nucleus |
ENSXMAP00000017097 | GO:0003707 | molecular_function | steroid hormone receptor activity |
ENSXMAP00000017097 | GO:0003708 | molecular_function | retinoic acid receptor activity |
ENSXMAP00000017097 | GO:0008270 | molecular_function | zinc ion binding |
ENSXMAP00000017097 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9103 | Meleagris gallopavo | 100545327 | 10029 | Cricetulus griseus | 100768698 |
9597 | Pan paniscus | 100992361 | 9555 | Papio anubis | 101010670 |
39432 | Saimiri boliviensis | 101053144 | 9669 | Mustela putorius furo | 101671927 |
59463 | Myotis lucifugus | 102425322 | 13735 | Pelodiscus sinensis | 102448036 |
10090 | Mus musculus | 218772 | 10116 | Rattus norvegicus | 24706 |
9031 | Gallus gallus | 396266 | 7668 | Strongylocentrotus purpuratus | 574567 |
9606 | Homo sapiens | 5915 | 59729 | Taeniopygia guttata | 778446 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000000740 | 9913 | Bos taurus | ENSBTAG00000011518 |
9483 | Callithrix jacchus | ENSCJAG00000003911 | 10141 | Cavia porcellus | ENSCPOG00000015410 |
9361 | Dasypus novemcinctus | ENSDNOG00000010433 | 9796 | Equus caballus | ENSECAG00000016976 |
9365 | Erinaceus europaeus | ENSEEUG00000006140 | 9595 | Gorilla gorilla | ENSGGOG00000002331 |
9785 | Loxodonta africana | ENSLAFG00000015824 | 9544 | Macaca mulatta | ENSMMUG00000007367 |
13616 | Monodelphis domestica | ENSMODG00000014926 | 9258 | Ornithorhynchus anatinus | ENSOANG00000012236 |
9986 | Oryctolagus cuniculus | ENSOCUG00000000714 | 8128 | Oreochromis niloticus | ENSONIG00000010320 |
8090 | Oryzias latipes | ENSORLG00000008502 | 7757 | Petromyzon marinus | ENSPMAG00000000088 |
9601 | Pongo abelii | ENSPPYG00000014062 | 42254 | Sorex araneus | ENSSARG00000003129 |
9305 | Sarcophilus harrisii | ENSSHAG00000009801 | 9823 | Sus scrofa | ENSSSCG00000011212 |
9478 | Tarsius syrichta | ENSTSYG00000008658 | 8364 | Xenopus tropicalis | ENSXETG00000007272 |
9685 | Felis catus | 101085742 | 9598 | Pan troglodytes | 745516 |
51511 | Ciona savignyi | ENSCSAVG00000006794 | 132908 | Pteropus vampyrus | ENSPVAG00000012533 |
Paralogs | |||
102234352 | 102236110 | ENSXMAG00000014632 | ENSXMAG00000018718 |