'STRAP:multiple sequence alignments '

charite.christo.strap.extensions
Class SubcellularLocationSherLoc

java.lang.Object
  extended by charite.christo.strap.extensions.SubcellularLocationSherLoc
All Implemented Interfaces:
PredictSubcellularLocation

public class SubcellularLocationSherLoc
extends java.lang.Object
implements PredictSubcellularLocation

HELP Publication:: PUBMED:17392328 PUBMED:17094224


Nested Class Summary
 
Nested classes/interfaces inherited from interface charite.christo.protein.PredictSubcellularLocation
PredictSubcellularLocation.Prediction
 
Field Summary
 
Fields inherited from interface charite.christo.protein.PredictSubcellularLocation
CENTRIOLE, CYTOSKELETON, CYTOSOL, ER, ERROR, GOLGI, HUMAN, LYSOSOME, MAX_VARIABLE, MEMBRANE, MICROSOME, MITO_MATRIX, NUCLEUS, PEROXISOME, SECRETED, SYNAPSE, UNKNOWN
 
Constructor Summary
SubcellularLocationSherLoc()
           
 
Method Summary
 PredictSubcellularLocation.Prediction[] getCompartments()
           
 void setOrganism(int organism)
           
 void setResidueType(byte[] aa)
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

SubcellularLocationSherLoc

public SubcellularLocationSherLoc()
Method Detail

setOrganism

public void setOrganism(int organism)
Specified by:
setOrganism in interface PredictSubcellularLocation

getCompartments

public PredictSubcellularLocation.Prediction[] getCompartments()
Specified by:
getCompartments in interface PredictSubcellularLocation

setResidueType

public void setResidueType(byte[] aa)
Specified by:
setResidueType in interface PredictSubcellularLocation

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, Protein and StrapEvent.'