charite.christo.protein
Interface PredictSubcellularLocation

All Known Implementing Classes:

AbstractSubcellularLocation, SubcellularLocationHum_mPloc, SubcellularLocationPLOC, SubcellularLocationSherLoc

public interface PredictSubcellularLocation

Nested Class Summary

static class

PredictSubcellularLocation.Prediction

Field Summary

static int	CENTRIOLE
static int	CYTOSKELETON
static int	CYTOSOL
static int	ER
static PredictSubcellularLocation.Prediction[]	ERROR
static int	GOLGI
static int	HUMAN
static int	LYSOSOME
static int	MAX_VARIABLE
static int	MEMBRANE
static int	MICROSOME
static int	MITO_MATRIX
static int	NUCLEUS
static int	PEROXISOME
static int	SECRETED
static int	SYNAPSE
static int	UNKNOWN

Method Summary

PredictSubcellularLocation.Prediction[]	getCompartments()
void	setOrganism(int organism)
void	setResidueType(byte[] aa)

Field Detail

HUMAN

static final int HUMAN

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UNKNOWN

static final int UNKNOWN

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CYTOSOL

static final int CYTOSOL

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MITO_MATRIX

static final int MITO_MATRIX

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ER

static final int ER

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MICROSOME

static final int MICROSOME

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NUCLEUS

static final int NUCLEUS

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PEROXISOME

static final int PEROXISOME

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MEMBRANE

static final int MEMBRANE

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LYSOSOME

static final int LYSOSOME

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GOLGI

static final int GOLGI

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SYNAPSE

static final int SYNAPSE

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CYTOSKELETON

static final int CYTOSKELETON

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CENTRIOLE

static final int CENTRIOLE

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SECRETED

static final int SECRETED

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MAX_VARIABLE

static final int MAX_VARIABLE

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Constant Field Values

ERROR

static final PredictSubcellularLocation.Prediction[] ERROR

Method Detail

setResidueType

void setResidueType(byte[] aa)

setOrganism

void setOrganism(int organism)

getCompartments

PredictSubcellularLocation.Prediction[] getCompartments()