charite.christo.strap.extensions
Class TransmembraneHelix_SPLIT3

java.lang.Object
  charite.christo.protein.AbstractPredictionFromAminoacidSequence
      charite.christo.strap.extensions.TransmembraneHelix_SPLIT3

All Implemented Interfaces:

Disposable, HasControlPanel, HasSharedControlPanel, NeedsInternet, NeedsSharedInstance, PredictionFromAminoacidSequence, TransmembraneHelix_Predictor

public class TransmembraneHelix_SPLIT3
extends AbstractPredictionFromAminoacidSequence
implements TransmembraneHelix_Predictor, HasControlPanel, HasSharedControlPanel, NeedsInternet

HELP Authors: Davor Juretic, Croatia.
Server program written by Damir Zucic
Home page: HOME_PAGE:TransmembraneHelix_SPLIT3
Publications: PUBMED:8485300 PUBMED:12086524
Benchmarks: http://cubic.bioc.columbia.edu/service/tmh_benchmark/

Field Summary

Fields inherited from interface charite.christo.Disposable

NONE

Constructor Summary

TransmembraneHelix_SPLIT3()

Method Summary

char[]	compute(java.lang.String sequence)
java.lang.String	findUrlInText(java.lang.String sResponse)
javax.swing.JComponent	getSharedControlPanel()

Methods inherited from class charite.christo.protein.AbstractPredictionFromAminoacidSequence

compute, countResults, dispose, getControlPanel, getPrediction, getResultText, getSharedInstance, getUrlOfResult, serverRoot, setGappedSequences, setSharedInstance

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface charite.christo.protein.PredictionFromAminoacidSequence

compute, getPrediction, setGappedSequences

Methods inherited from interface charite.christo.HasControlPanel

getControlPanel

Methods inherited from interface charite.christo.NeedsSharedInstance

getSharedInstance, setSharedInstance

Constructor Detail

TransmembraneHelix_SPLIT3

public TransmembraneHelix_SPLIT3()

Method Detail

getSharedControlPanel

public javax.swing.JComponent getSharedControlPanel()

Specified by:

getSharedControlPanel in interface HasSharedControlPanel

findUrlInText

public java.lang.String findUrlInText(java.lang.String sResponse)

Overrides:

findUrlInText in class AbstractPredictionFromAminoacidSequence

compute

public char[] compute(java.lang.String sequence)

Specified by:

compute in class AbstractPredictionFromAminoacidSequence