'STRAP:multiple sequence alignments '

charite.christo
Interface HasControlPanel

All Known Implementing Classes:
AbstractAlignAndCompare, AbstractAligner, AbstractBlaster, Aligner3D, Aligner3D_Mapsci, Aligner3D_Matt, Aligner3D_Mustang, Aligner3D_Smolign, AlignmentScore, BasicExecutable, Blaster_local_NCBI, Blaster_local_NCBI_gapped_PSI, Blaster_local_Wu, Blaster_SOAP_ebi, ChAstexPROXY, ChExec, DialogDotPlot, Flavine, FlavinePROXY, IndividualSequenceDisSimilarity, IntermediateSeq, IntermediateSeqPair, MultiFromPairAligner, MultipleAligner_SPEM, MultipleAlignerAlign_m, MultipleAlignerAmap, MultipleAlignerClustalW, MultipleAlignerDialign, MultipleAlignerDialignT, MultipleAlignerKalign, MultipleAlignerMafft, MultipleAlignerMuscle, MultipleAlignerProbcons2, MultipleAlignerT_Coffee, NativeTools, PairAlignerJAligner, PairAlignerNeoBio, PhylogeneticTree_Archaeopteryx, ResidueValues_from_textfile, RmsdValue, SecondaryStructure_Jnet, SecondaryStructure_NNPREDICT, SecondaryStructure_Sopma, SequenceDisSimilarityAsAligned, Superimpose_CE, Superimpose_GangstaPlus, Superimpose_LajollaProtein, Superimpose_native_CE, Superimpose_TM_align, Toppred, TransmembraneHelix_DAS, TransmembraneHelix_HMMTOP, TransmembraneHelix_MEMSAT, TransmembraneHelix_ORIENTM, TransmembraneHelix_Phobius, TransmembraneHelix_PRED_TMR, TransmembraneHelix_SOSUI, TransmembraneHelix_SPLIT3, TransmembraneHelix_SPLIT4, TransmembraneHelix_THUMBUP, TransmembraneHelix_TMAP, TransmembraneHelix_TMAP_MULTI, TransmembraneHelix_TMHMM2, TransmembraneHelix_TMPRED, TransmembraneHelix_WaveTM

public interface HasControlPanel

Implemented by objects that can contain a GUI where the user can manipulate the inner state. This version refers to control panel of a specific instance. Compare HasSharedControlPanel which provides a control panel for static context. This interface can be implemented by plugins written by users. The user can access the control panel by pressing a tool button ICON:ChUtils#IC_CONTROLPANEL


Method Summary
 javax.swing.JComponent getControlPanel(boolean real)
           
 

Method Detail

getControlPanel

javax.swing.JComponent getControlPanel(boolean real)

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, Protein and StrapEvent.'