'STRAP:multiple sequence alignments '

charite.christo.strap.extensions
Class TransmembraneHelix_TMPRED

java.lang.Object
  extended by charite.christo.protein.AbstractPredictionFromAminoacidSequence
      extended by charite.christo.strap.extensions.TransmembraneHelix_TMPRED
All Implemented Interfaces:
Disposable, HasControlPanel, HasSharedControlPanel, NeedsInternet, NeedsSharedInstance, PredictionFromAminoacidSequence, TransmembraneHelix_Predictor

public class TransmembraneHelix_TMPRED
extends AbstractPredictionFromAminoacidSequence
implements TransmembraneHelix_Predictor, HasControlPanel, HasSharedControlPanel, NeedsInternet

HELP Web site: HOME_PAGE:TransmembraneHelix_TMPRED
Author: K Hofmann and W Stoffel


Field Summary
 
Fields inherited from interface charite.christo.Disposable
NONE
 
Constructor Summary
TransmembraneHelix_TMPRED()
           
 
Method Summary
 char[] compute(java.lang.String sequ)
           
 javax.swing.JComponent getSharedControlPanel()
           
 
Methods inherited from class charite.christo.protein.AbstractPredictionFromAminoacidSequence
compute, countResults, dispose, findUrlInText, getControlPanel, getPrediction, getResultText, getSharedInstance, getUrlOfResult, serverRoot, setGappedSequences, setSharedInstance
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 
Methods inherited from interface charite.christo.protein.PredictionFromAminoacidSequence
compute, getPrediction, setGappedSequences
 
Methods inherited from interface charite.christo.HasControlPanel
getControlPanel
 
Methods inherited from interface charite.christo.NeedsSharedInstance
getSharedInstance, setSharedInstance
 

Constructor Detail

TransmembraneHelix_TMPRED

public TransmembraneHelix_TMPRED()
Method Detail

getSharedControlPanel

public javax.swing.JComponent getSharedControlPanel()
Specified by:
getSharedControlPanel in interface HasSharedControlPanel

compute

public char[] compute(java.lang.String sequ)
Specified by:
compute in class AbstractPredictionFromAminoacidSequence

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, Protein and StrapEvent.'