Basic Information
Gene ID 585635
Gene Name LOC585635
Full Name PREDICTED: LIM homeobox transcription factor 1-beta-like[Strongylocentrotus purpuratus].
Organism Strongylocentrotus purpuratus [7668]

Cross Reference
UniProt NULL UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_790548 Gene3D G3DSA:1.10.10.60 IPR009057 156 222 2.30e-23 Homeodomain-like
XP_790548 Gene3D G3DSA:2.10.110.10 IPR001781 32 95 1.10e-15 Zinc finger, LIM-type
XP_790548 Gene3D G3DSA:2.10.110.10 IPR001781 96 148 1.50e-16 Zinc finger, LIM-type
XP_790548 Pfam PF00046 IPR001356 171 227 1.60e-17 Homeobox domain
XP_790548 Pfam PF00412 IPR001781 33 88 5.90e-14 Zinc finger, LIM-type
XP_790548 Pfam PF00412 IPR001781 92 149 1.40e-16 Zinc finger, LIM-type
XP_790548 ProSitePatterns PS00027 IPR017970 203 226 - Homeobox, conserved site
XP_790548 ProSitePatterns PS00478 IPR001781 33 67 - Zinc finger, LIM-type
XP_790548 ProSitePatterns PS00478 IPR001781 92 127 - Zinc finger, LIM-type
XP_790548 ProSiteProfiles PS50023 IPR001781 31 89 0.00e-00 Zinc finger, LIM-type
XP_790548 ProSiteProfiles PS50023 IPR001781 90 152 0.00e-00 Zinc finger, LIM-type
XP_790548 ProSiteProfiles PS50071 IPR001356 168 228 0.00e-00 Homeobox domain
XP_790548 SMART SM00132 IPR001781 32 83 2.60e-17 Zinc finger, LIM-type
XP_790548 SMART SM00132 IPR001781 91 145 9.00e-20 Zinc finger, LIM-type
XP_790548 SMART SM00389 IPR001356 170 232 4.70e-24 Homeobox domain
XP_790548 SUPERFAMILY SSF46689 IPR009057 156 228 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_790548 PF00412 6.5e-31 LIM LIM domain
XP_790548 PF00046 9.8e-18 Homeobox Homeobox domain
XP_790548 PF05920 7e-05 Homeobox_KN Homeobox KN domain

Gene Ontology Annotation
Protein Entry Name Space Description
XP_790548 GO:0006351 biological_process transcription, DNA-templated
XP_790548 GO:0006355 biological_process regulation of transcription, DNA-templated
XP_790548 GO:0007275 biological_process multicellular organismal development
XP_790548 GO:0005634 cellular_component nucleus
XP_790548 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
XP_790548 GO:0008270 molecular_function zinc ion binding
XP_790548 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
10224 Saccoglossus kowalevskii 100328994 9595 Gorilla gorilla 101151857
13616 Monodelphis domestica 100016205 7425 Nasonia vitripennis 100121564
7029 Acyrthosiphon pisum 100166469 9986 Oryctolagus cuniculus 100338248
9646 Ailuropoda melanoleuca 100475199 30195 Bombus terrestris 100644798
8128 Oreochromis niloticus 100696266 132113 Bombus impatiens 100744167
10029 Cricetulus griseus 100760113 7463 Apis florea 100872112
143995 Megachile rotundata 100879464 34638 Metaseiulus occidentalis 100909136
9597 Pan paniscus 100984491 9555 Papio anubis 101014470
39432 Saimiri boliviensis 101047214 9685 Felis catus 101086098
8090 Oryzias latipes 101159592 9669 Mustela putorius furo 101686194
13735 Pelodiscus sinensis 102445048 10090 Mus musculus 110648
7227 Drosophila melanogaster 39406 7955 Danio rerio 554360
9615 Canis familiaris 609061 7070 Tribolium castaneum 655586
7460 Apis mellifera 724778 28377 Anolis carolinensis ENSACAG00000004557
9913 Bos taurus ENSBTAG00000010228 7719 Ciona intestinalis ENSCING00000013048
9483 Callithrix jacchus ENSCJAG00000007071 10141 Cavia porcellus ENSCPOG00000023429
9361 Dasypus novemcinctus ENSDNOG00000012261 10020 Dipodomys ordii ENSDORG00000014036
9796 Equus caballus ENSECAG00000018605 9365 Erinaceus europaeus ENSEEUG00000007978
9371 Echinops telfairi ENSETEG00000005532 69293 Gasterosteus aculeatus ENSGACG00000012015
9031 Gallus gallus ENSGALG00000000936 8049 Gadus morhua ENSGMOG00000006452
7897 Latimeria chalumnae ENSLACG00000015722 9785 Loxodonta africana ENSLAFG00000015481
9315 Macropus eugenii ENSMEUG00000012451 9103 Meleagris gallopavo ENSMGAG00000003603
9544 Macaca mulatta ENSMMUG00000002236 61853 Nomascus leucogenys ENSNLEG00000017412
30611 Otolemur garnettii ENSOGAG00000001158 9978 Ochotona princeps ENSOPRG00000015599
9598 Pan troglodytes ENSPTRG00000021377 132908 Pteropus vampyrus ENSPVAG00000004265
10116 Rattus norvegicus ENSRNOG00000017019 9823 Sus scrofa ENSSSCG00000005606
43179 Ictidomys tridecemlineatus ENSSTOG00000026973 59729 Taeniopygia guttata ENSTGUG00000017316
99883 Tetraodon nigroviridis ENSTNIG00000018553 31033 Takifugu rubripes ENSTRUG00000009042
9478 Tarsius syrichta ENSTSYG00000012930 9739 Tursiops truncatus ENSTTRG00000003649
30538 Vicugna pacos ENSVPAG00000004576 8364 Xenopus tropicalis ENSXETG00000013183
8083 Xiphophorus maculatus ENSXMAG00000013334 9813 Procavia capensis ENSPCAG00000013608