Bioinformatics.org
[NEU MS in Bioinformatics]
Not logged in

Bioinformatics.org
Membership (37265+) Group hosting [?]

Careers
About bioinformatics
Bioinformatics training
Bioinformatics jobs

Research
All information groups
Online databases Online analysis tools Online education tools More tools

Development
All software groups
FTP repository
SVN & CVS repositories [?]
Mailing lists

Forums
News & Commentary
Jobs Forum
(Career Center)

CD-HIT: Sequence clustering software - Downloads

cd-hit 4.5.4 (tgz)

Release notes:

Add: support for FASTQ file as input;
MinorChange: default value of "-n" for DNA sequence from 8 to 10;
MinorFix: alignment locations and length;

Add: cd-hit-454 program to the main package (cdhit-454.c++);
Add: options to change the scoring settings;
Add: options to control the length of unmatched region.
Add: improvement to sequence partition for parallelization;
Change: default identity threshold from 0.9 to 0.95 for EST.


Changelog:

 

Copyright © 2016 · Scilico, LLC