Basic Information
Gene ID 100304452
Gene Name sox10b
Full Name SRY-box containing gene 10b
Organism Oryzias latipes [8090]

Cross Reference
UniProt C3VV13 UniGene Ola.23441
PDB NULL OMIM NULL
KEGG ola:100304452 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8090.ENSORLP00000018288

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSORLP00000018288 Gene3D G3DSA:1.10.30.10 IPR009071 101 181 3.70e-34 High mobility group box domain
ENSORLP00000018288 Pfam PF00505 IPR009071 103 171 1.70e-25 High mobility group box domain
ENSORLP00000018288 Pfam PF12444 IPR022151 13 93 6.30e-29 Sox developmental protein N-terminal
ENSORLP00000018288 ProSiteProfiles PS50118 IPR009071 103 171 0.00e-00 High mobility group box domain
ENSORLP00000018288 SMART SM00398 IPR009071 102 172 4.60e-31 High mobility group box domain
ENSORLP00000018288 SUPERFAMILY SSF47095 IPR009071 85 175 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSORLP00000018288 PF12444 6.3e-29 Sox_N Sox developmental protein N terminal
ENSORLP00000018288 PF00505 1.1e-25 HMG_box HMG (high mobility group) box
ENSORLP00000018288 PF09011 1.2e-10 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSORLP00000018288 GO:0006351 biological_process transcription, DNA-templated
ENSORLP00000018288 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSORLP00000018288 GO:0007275 biological_process multicellular organismal development
ENSORLP00000018288 GO:0014029 biological_process neural crest formation
ENSORLP00000018288 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSORLP00000018288 GO:0005634 cellular_component nucleus
ENSORLP00000018288 GO:0005737 cellular_component cytoplasm
ENSORLP00000018288 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9615 Canis familiaris 481258 9103 Meleagris gallopavo ENSMGAG00000012508
9483 Callithrix jacchus 100404951 8128 Oreochromis niloticus 100534551
10141 Cavia porcellus 100725927 9823 Sus scrofa 100737411
10029 Cricetulus griseus 100754443 34638 Metaseiulus occidentalis 100903070
30611 Otolemur garnettii 100951618 9597 Pan paniscus 100970122
9555 Papio anubis 100998198 39432 Saimiri boliviensis 101051303
9669 Mustela putorius furo 101685253 43179 Ictidomys tridecemlineatus 101969095
7897 Latimeria chalumnae 102354873 13735 Pelodiscus sinensis 102463380
7955 Danio rerio 140616 10116 Rattus norvegicus 29361
9646 Ailuropoda melanoleuca ENSAMEG00000010350 9796 Equus caballus ENSECAG00000024147
9365 Erinaceus europaeus ENSEEUG00000011263 9371 Echinops telfairi ENSETEG00000012633
9685 Felis catus ENSFCAG00000002807 69293 Gasterosteus aculeatus ENSGACG00000007318
9031 Gallus gallus ENSGALG00000012290 8049 Gadus morhua ENSGMOG00000009956
9315 Macropus eugenii ENSMEUG00000008079 30608 Microcebus murinus ENSMICG00000013132
59463 Myotis lucifugus ENSMLUG00000014317 13616 Monodelphis domestica ENSMODG00000019062
9601 Pongo abelii ENSPPYG00000011810 132908 Pteropus vampyrus ENSPVAG00000010109
99883 Tetraodon nigroviridis ENSTNIG00000010828 31033 Takifugu rubripes ENSTRUG00000008350
9739 Tursiops truncatus ENSTTRG00000004818 8083 Xiphophorus maculatus ENSXMAG00000001603