Basic Information | |||
Gene ID | 100737411 | ||
Gene Name | LOC100737411 | ||
Full Name | Uncharacterized protein | ||
Organism | Sus scrofa [9823] |
Cross Reference | |||
UniProt | I3LI81 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | ssc:100737411 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSSCP00000023780 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 107 | 184 | 2.70e-33 | High mobility group box domain |
ENSSSCP00000023780 | Pfam | PF00505 | IPR009071 | 109 | 177 | 3.50e-24 | High mobility group box domain |
ENSSSCP00000023780 | Pfam | PF12444 | IPR022151 | 12 | 99 | 3.60e-25 | Sox developmental protein N-terminal |
ENSSSCP00000023780 | ProSiteProfiles | PS50118 | IPR009071 | 109 | 177 | 0.00e-00 | High mobility group box domain |
ENSSSCP00000023780 | SMART | SM00398 | IPR009071 | 108 | 178 | 2.70e-29 | High mobility group box domain |
ENSSSCP00000023780 | SUPERFAMILY | SSF47095 | IPR009071 | 91 | 181 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSSCP00000023780 | PF12444 | 9.5e-26 | Sox_N | Sox developmental protein N terminal |
ENSSSCP00000023780 | PF00505 | 2.1e-24 | HMG_box | HMG (high mobility group) box |
ENSSSCP00000023780 | PF09011 | 2.8e-10 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSSSCP00000023780 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSSSCP00000023780 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSSSCP00000023780 | GO:0007275 | biological_process | multicellular organismal development |
ENSSSCP00000023780 | GO:0014029 | biological_process | neural crest formation |
ENSSSCP00000023780 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
ENSSSCP00000023780 | GO:0005634 | cellular_component | nucleus |
ENSSSCP00000023780 | GO:0005737 | cellular_component | cytoplasm |
ENSSSCP00000023780 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
8090 | Oryzias latipes | 100304452 | 9483 | Callithrix jacchus | 100404951 |
8128 | Oreochromis niloticus | 100534551 | 10029 | Cricetulus griseus | 100754443 |
30611 | Otolemur garnettii | 100951618 | 9555 | Papio anubis | 100998198 |
39432 | Saimiri boliviensis | 101051303 | 9669 | Mustela putorius furo | 101685253 |
43179 | Ictidomys tridecemlineatus | 101969095 | 13735 | Pelodiscus sinensis | 102463380 |
7955 | Danio rerio | 140616 | 10116 | Rattus norvegicus | 29361 |
10020 | Dipodomys ordii | ENSDORG00000003967 | 9796 | Equus caballus | ENSECAG00000024147 |
9685 | Felis catus | ENSFCAG00000002807 | 9031 | Gallus gallus | ENSGALG00000012290 |
9315 | Macropus eugenii | ENSMEUG00000008079 | 9103 | Meleagris gallopavo | ENSMGAG00000012508 |
9601 | Pongo abelii | ENSPPYG00000011810 | 132908 | Pteropus vampyrus | ENSPVAG00000010109 |
8083 | Xiphophorus maculatus | ENSXMAG00000001603 | 7897 | Latimeria chalumnae | 102354873 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000010350 | 8049 | Gadus morhua | ENSGMOG00000005629 |
13616 | Monodelphis domestica | ENSMODG00000019062 | 9598 | Pan troglodytes | ENSPTRG00000014357 |
9739 | Tursiops truncatus | ENSTTRG00000004818 |
Paralogs | |||
ENSSSCG00000000115 |