Basic Information
Gene ID 29361 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Sox10
Full Name Transcription factor SOX-10
Organism Rattus norvegicus [10116]

Cross Reference
UniProt O55170 UniGene Rn.10883
PDB NULL OMIM NULL
KEGG rno:29361 UCSC RGD:3735

Protein Interactions
DIP NULL
IntAct O55170
MINT MINT-3376332
STRING 10116.ENSRNOP00000015283

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000015283 Gene3D G3DSA:1.10.30.10 IPR009071 102 179 2.70e-33 High mobility group box domain
ENSRNOP00000015283 Pfam PF00505 IPR009071 104 172 3.40e-24 High mobility group box domain
ENSRNOP00000015283 Pfam PF12444 IPR022151 12 94 1.60e-24 Sox developmental protein N-terminal
ENSRNOP00000015283 ProSiteProfiles PS50118 IPR009071 104 172 0.00e-00 High mobility group box domain
ENSRNOP00000015283 SMART SM00398 IPR009071 103 173 2.70e-29 High mobility group box domain
ENSRNOP00000015283 SUPERFAMILY SSF47095 IPR009071 86 176 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000015283 PF12444 3.8e-25 Sox_N Sox developmental protein N terminal
ENSRNOP00000015283 PF00505 2e-24 HMG_box HMG (high mobility group) box
ENSRNOP00000015283 PF09011 2.7e-10 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000015283 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000015283 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSRNOP00000015283 GO:0007275 biological_process multicellular organismal development
ENSRNOP00000015283 GO:0014029 biological_process neural crest formation
ENSRNOP00000015283 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSRNOP00000015283 GO:0005634 cellular_component nucleus
ENSRNOP00000015283 GO:0005737 cellular_component cytoplasm
ENSRNOP00000015283 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
10224 Saccoglossus kowalevskii 100367276 9483 Callithrix jacchus 100404951
8128 Oreochromis niloticus 100534551 7029 Acyrthosiphon pisum 100572600
9823 Sus scrofa 100737411 10029 Cricetulus griseus 100754443
30611 Otolemur garnettii 100951618 9555 Papio anubis 100998198
39432 Saimiri boliviensis 101051303 9595 Gorilla gorilla 101135517
9669 Mustela putorius furo 101685253 7897 Latimeria chalumnae 102354873
13735 Pelodiscus sinensis 102463380 8090 Oryzias latipes 100304452
10141 Cavia porcellus 100725927 9597 Pan paniscus 100970122
43179 Ictidomys tridecemlineatus 101969095 7955 Danio rerio 140616
9615 Canis familiaris 481258 28377 Anolis carolinensis ENSACAG00000008719
9365 Erinaceus europaeus ENSEEUG00000011263 9685 Felis catus ENSFCAG00000002807
9315 Macropus eugenii ENSMEUG00000008079 9103 Meleagris gallopavo ENSMGAG00000012508
9986 Oryctolagus cuniculus ENSOCUG00000011639 9978 Ochotona princeps ENSOPRG00000013575
9305 Sarcophilus harrisii ENSSHAG00000008406 99883 Tetraodon nigroviridis ENSTNIG00000010828
7227 Drosophila melanogaster 45039 7668 Strongylocentrotus purpuratus 581729
9646 Ailuropoda melanoleuca ENSAMEG00000010350 7719 Ciona intestinalis ENSCING00000001019
51511 Ciona savignyi ENSCSAVG00000008424 10020 Dipodomys ordii ENSDORG00000003967
9796 Equus caballus ENSECAG00000024147 9371 Echinops telfairi ENSETEG00000012633
69293 Gasterosteus aculeatus ENSGACG00000011185 9031 Gallus gallus ENSGALG00000012290
8049 Gadus morhua ENSGMOG00000005629 9785 Loxodonta africana ENSLAFG00000001445
30608 Microcebus murinus ENSMICG00000013132 59463 Myotis lucifugus ENSMLUG00000014317
9544 Macaca mulatta ENSMMUG00000002412 13616 Monodelphis domestica ENSMODG00000019062
61853 Nomascus leucogenys ENSNLEG00000002643 9813 Procavia capensis ENSPCAG00000005913
9601 Pongo abelii ENSPPYG00000011810 9598 Pan troglodytes ENSPTRG00000014357
132908 Pteropus vampyrus ENSPVAG00000010109 37347 Tupaia belangeri ENSTBEG00000000175
31033 Takifugu rubripes ENSTRUG00000008350 9739 Tursiops truncatus ENSTTRG00000004818
30538 Vicugna pacos ENSVPAG00000000908 8364 Xenopus tropicalis ENSXETG00000022348
8083 Xiphophorus maculatus ENSXMAG00000001603