Basic Information
Gene ID 140616
Gene Name sox10
Full Name HMG-box transcription factor Sox10
Organism Danio rerio [7955]

Cross Reference
UniProt Q90XD1 UniGene Dr.83682
PDB NULL OMIM NULL
KEGG dre:140616 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSDARP00000100237 Gene3D G3DSA:1.10.30.10 IPR009071 106 186 9.50e-33 High mobility group box domain
ENSDARP00000100237 Pfam PF00505 IPR009071 108 176 2.80e-24 High mobility group box domain
ENSDARP00000100237 Pfam PF12444 IPR022151 12 98 2.70e-28 Sox developmental protein N-terminal
ENSDARP00000100237 ProSiteProfiles PS50118 IPR009071 108 176 0.00e-00 High mobility group box domain
ENSDARP00000100237 SMART SM00398 IPR009071 107 177 8.60e-30 High mobility group box domain
ENSDARP00000100237 SUPERFAMILY SSF47095 IPR009071 90 180 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSDARP00000100237 PF12444 2.7e-28 Sox_N Sox developmental protein N terminal
ENSDARP00000100237 PF00505 1.8e-24 HMG_box HMG (high mobility group) box
ENSDARP00000100237 PF09011 2.3e-10 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSDARP00000100237 GO:0006351 biological_process transcription, DNA-templated
ENSDARP00000100237 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSDARP00000100237 GO:0007275 biological_process multicellular organismal development
ENSDARP00000100237 GO:0014029 biological_process neural crest formation
ENSDARP00000100237 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSDARP00000100237 GO:0005634 cellular_component nucleus
ENSDARP00000100237 GO:0005737 cellular_component cytoplasm
ENSDARP00000100237 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
6087 Hydra magnipapillata 100201982 9483 Callithrix jacchus 100404951
8128 Oreochromis niloticus 100534551 9823 Sus scrofa 100737411
10029 Cricetulus griseus 100754443 30611 Otolemur garnettii 100951618
9555 Papio anubis 100998198 39432 Saimiri boliviensis 101051303
9669 Mustela putorius furo 101685253 7897 Latimeria chalumnae 102354873
13735 Pelodiscus sinensis 102463380 8090 Oryzias latipes 100304452
10141 Cavia porcellus 100725927 9597 Pan paniscus 100970122
43179 Ictidomys tridecemlineatus 101969095 9615 Canis familiaris 481258
9103 Meleagris gallopavo ENSMGAG00000012508 9978 Ochotona princeps ENSOPRG00000013575
99883 Tetraodon nigroviridis ENSTNIG00000010828 10116 Rattus norvegicus 29361
9646 Ailuropoda melanoleuca ENSAMEG00000010350 9796 Equus caballus ENSECAG00000024147
9365 Erinaceus europaeus ENSEEUG00000011263 9371 Echinops telfairi ENSETEG00000012633
9685 Felis catus ENSFCAG00000002807 69293 Gasterosteus aculeatus ENSGACG00000007318
9031 Gallus gallus ENSGALG00000012290 8049 Gadus morhua ENSGMOG00000005629
9315 Macropus eugenii ENSMEUG00000008079 30608 Microcebus murinus ENSMICG00000013132
59463 Myotis lucifugus ENSMLUG00000014317 13616 Monodelphis domestica ENSMODG00000019062
7757 Petromyzon marinus ENSPMAG00000006957 9601 Pongo abelii ENSPPYG00000011810
132908 Pteropus vampyrus ENSPVAG00000010109 31033 Takifugu rubripes ENSTRUG00000008350
9739 Tursiops truncatus ENSTTRG00000004818 8083 Xiphophorus maculatus ENSXMAG00000001603