Basic Information | |||
Gene ID | 100543659 | ||
Gene Name | HMGB1 | ||
Full Name | Uncharacterized protein | ||
Organism | Meleagris gallopavo [9103] |
Cross Reference | |||
UniProt | G1NQB9 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | mgp:100543659 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSMGAP00000016001 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 8 | 78 | 2.80e-29 | High mobility group box domain |
ENSMGAP00000016001 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 93 | 167 | 9.50e-32 | High mobility group box domain |
ENSMGAP00000016001 | Pfam | PF00505 | IPR009071 | 95 | 163 | 1.70e-27 | High mobility group box domain |
ENSMGAP00000016001 | Pfam | PF09011 | IPR009071 | 6 | 78 | 1.70e-26 | High mobility group box domain |
ENSMGAP00000016001 | ProSitePatterns | PS00353 | IPR017967 | 41 | 52 | - | HMG box A DNA-binding domain, conserved site |
ENSMGAP00000016001 | ProSiteProfiles | PS50118 | IPR009071 | 95 | 163 | 0.00e-00 | High mobility group box domain |
ENSMGAP00000016001 | ProSiteProfiles | PS50118 | IPR009071 | 9 | 79 | 0.00e-00 | High mobility group box domain |
ENSMGAP00000016001 | SMART | SM00398 | IPR009071 | 8 | 80 | 7.90e-28 | High mobility group box domain |
ENSMGAP00000016001 | SMART | SM00398 | IPR009071 | 94 | 164 | 1.60e-33 | High mobility group box domain |
ENSMGAP00000016001 | SUPERFAMILY | SSF47095 | IPR009071 | 3 | 81 | 0.00e-00 | High mobility group box domain |
ENSMGAP00000016001 | SUPERFAMILY | SSF47095 | IPR009071 | 79 | 164 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSMGAP00000016001 | PF00505 | 4.1002e-42 | HMG_box | HMG (high mobility group) box |
ENSMGAP00000016001 | PF09011 | 1.10002e-41 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSMGAP00000016001 | GO:0005634 | cellular_component | nucleus |
ENSMGAP00000016001 | GO:0005694 | cellular_component | chromosome |
ENSMGAP00000016001 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100033873 | 7029 | Acyrthosiphon pisum | 100167132 |
6087 | Hydra magnipapillata | 100204109 | 10029 | Cricetulus griseus | 100772377 |
7463 | Apis florea | 100871828 | 143995 | Megachile rotundata | 100876876 |
34638 | Metaseiulus occidentalis | 100900993 | 8083 | Xiphophorus maculatus | 102238067 |
7897 | Latimeria chalumnae | 102366474 | 8364 | Xenopus tropicalis | 394834 |
7070 | Tribolium castaneum | 662763 | 9544 | Macaca mulatta | 712849 |
7460 | Apis mellifera | 725551 | 9598 | Pan troglodytes | 736904 |
7719 | Ciona intestinalis | 778643 | 28377 | Anolis carolinensis | ENSACAG00000005092 |
9615 | Canis familiaris | ENSCAFG00000023930 | 9358 | Choloepus hoffmanni | ENSCHOG00000002423 |
10141 | Cavia porcellus | ENSCPOG00000003985 | 10020 | Dipodomys ordii | ENSDORG00000010826 |
9371 | Echinops telfairi | ENSETEG00000004048 | 9685 | Felis catus | ENSFCAG00000000200 |
69293 | Gasterosteus aculeatus | ENSGACG00000020545 | 8049 | Gadus morhua | ENSGMOG00000019231 |
13616 | Monodelphis domestica | ENSMODG00000008785 | 9258 | Ornithorhynchus anatinus | ENSOANG00000014719 |
9986 | Oryctolagus cuniculus | ENSOCUG00000004133 | 9978 | Ochotona princeps | ENSOPRG00000003507 |
8090 | Oryzias latipes | ENSORLG00000003951 | 9813 | Procavia capensis | ENSPCAG00000002201 |
7757 | Petromyzon marinus | ENSPMAG00000007397 | 9601 | Pongo abelii | ENSPPYG00000011668 |
132908 | Pteropus vampyrus | ENSPVAG00000001431 | 10116 | Rattus norvegicus | ENSRNOG00000037945 |
42254 | Sorex araneus | ENSSARG00000004470 | 37347 | Tupaia belangeri | ENSTBEG00000014925 |
9478 | Tarsius syrichta | ENSTSYG00000012587 | 9739 | Tursiops truncatus | ENSTTRG00000010327 |
400682 | Amphimedon queenslandica | 100635010 | 132113 | Bombus impatiens | 100749348 |
9597 | Pan paniscus | 100980430 | 9555 | Papio anubis | 101026485 |
39432 | Saimiri boliviensis | 101045330 | 31033 | Takifugu rubripes | 101074166 |
59463 | Myotis lucifugus | 102420405 | 13735 | Pelodiscus sinensis | 102454149 |
7227 | Drosophila melanogaster | 117294 | 10090 | Mus musculus | 15289 |
9913 | Bos taurus | 282691 | 9606 | Homo sapiens | 3146 |
9823 | Sus scrofa | 445521 | 9483 | Callithrix jacchus | ENSCJAG00000022832 |
51511 | Ciona savignyi | ENSCSAVG00000000341 | 9595 | Gorilla gorilla | ENSGGOG00000025109 |
9315 | Macropus eugenii | ENSMEUG00000001380 | 30608 | Microcebus murinus | ENSMICG00000006213 |
30611 | Otolemur garnettii | ENSOGAG00000003205 | 9305 | Sarcophilus harrisii | ENSSHAG00000014034 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000000443 | 99883 | Tetraodon nigroviridis | ENSTNIG00000016258 |
30538 | Vicugna pacos | ENSVPAG00000000096 |
Paralogs | |||
ENSMGAG00000006836 |