Basic Information
Gene ID 102454149
Gene Name HMGB1
Full Name Uncharacterized protein
Organism Pelodiscus sinensis [13735]

Cross Reference
UniProt K7FJB3 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSPSIP00000008123 Gene3D G3DSA:1.10.30.10 IPR009071 8 78 9.00e-29 High mobility group box domain
ENSPSIP00000008123 Gene3D G3DSA:1.10.30.10 IPR009071 93 168 4.20e-32 High mobility group box domain
ENSPSIP00000008123 Pfam PF00505 IPR009071 95 163 1.70e-27 High mobility group box domain
ENSPSIP00000008123 Pfam PF09011 IPR009071 6 78 7.30e-27 High mobility group box domain
ENSPSIP00000008123 ProSitePatterns PS00353 IPR017967 41 52 - HMG box A DNA-binding domain, conserved site
ENSPSIP00000008123 ProSiteProfiles PS50118 IPR009071 95 163 0.00e-00 High mobility group box domain
ENSPSIP00000008123 ProSiteProfiles PS50118 IPR009071 9 79 0.00e-00 High mobility group box domain
ENSPSIP00000008123 SMART SM00398 IPR009071 8 80 6.60e-28 High mobility group box domain
ENSPSIP00000008123 SMART SM00398 IPR009071 94 164 1.60e-33 High mobility group box domain
ENSPSIP00000008123 SUPERFAMILY SSF47095 IPR009071 3 81 0.00e-00 High mobility group box domain
ENSPSIP00000008123 SUPERFAMILY SSF47095 IPR009071 78 164 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSPSIP00000008123 PF09011 5.70328e-43 HMG_box_2 HMG-box domain
ENSPSIP00000008123 PF00505 7.49975e-42 HMG_box HMG (high mobility group) box

Gene Ontology Annotation
Protein Entry Name Space Description
ENSPSIP00000008123 GO:0005634 cellular_component nucleus
ENSPSIP00000008123 GO:0005694 cellular_component chromosome
ENSPSIP00000008123 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9796 Equus caballus 100033873 400682 Amphimedon queenslandica 100635010
31033 Takifugu rubripes 101074166 7425 Nasonia vitripennis 100122354
7029 Acyrthosiphon pisum 100167132 9103 Meleagris gallopavo 100543659
132113 Bombus impatiens 100749348 7463 Apis florea 100871828
143995 Megachile rotundata 100876876 9597 Pan paniscus 100980430
9555 Papio anubis 101026485 39432 Saimiri boliviensis 101045330
8083 Xiphophorus maculatus 102238067 7897 Latimeria chalumnae 102366474
59463 Myotis lucifugus 102420405 10090 Mus musculus 15289
9913 Bos taurus 282691 8364 Xenopus tropicalis 394834
9823 Sus scrofa 445521 7070 Tribolium castaneum 662763
9544 Macaca mulatta 712849 7460 Apis mellifera 725551
9598 Pan troglodytes 736904 28377 Anolis carolinensis ENSACAG00000005092
9646 Ailuropoda melanoleuca ENSAMEG00000011652 9615 Canis familiaris ENSCAFG00000023930
9358 Choloepus hoffmanni ENSCHOG00000002423 10141 Cavia porcellus ENSCPOG00000003985
9371 Echinops telfairi ENSETEG00000004048 9685 Felis catus ENSFCAG00000000200
69293 Gasterosteus aculeatus ENSGACG00000020545 9595 Gorilla gorilla ENSGGOG00000025109
8049 Gadus morhua ENSGMOG00000019231 9315 Macropus eugenii ENSMEUG00000001380
30608 Microcebus murinus ENSMICG00000006213 13616 Monodelphis domestica ENSMODG00000009238
9258 Ornithorhynchus anatinus ENSOANG00000014719 9986 Oryctolagus cuniculus ENSOCUG00000021335
30611 Otolemur garnettii ENSOGAG00000003205 9978 Ochotona princeps ENSOPRG00000003507
8090 Oryzias latipes ENSORLG00000003951 9813 Procavia capensis ENSPCAG00000002201
9601 Pongo abelii ENSPPYG00000011668 132908 Pteropus vampyrus ENSPVAG00000001431
10116 Rattus norvegicus ENSRNOG00000037945 42254 Sorex araneus ENSSARG00000004470
9305 Sarcophilus harrisii ENSSHAG00000014034 43179 Ictidomys tridecemlineatus ENSSTOG00000000443
37347 Tupaia belangeri ENSTBEG00000014925 99883 Tetraodon nigroviridis ENSTNIG00000016258
9478 Tarsius syrichta ENSTSYG00000012587 9739 Tursiops truncatus ENSTTRG00000010327
7227 Drosophila melanogaster 117294 9606 Homo sapiens 3146
9483 Callithrix jacchus ENSCJAG00000022832 51511 Ciona savignyi ENSCSAVG00000000341
9361 Dasypus novemcinctus ENSDNOG00000005537

Paralogs
ENSPSIG00000015958 102455330