Basic Information | |||
Gene ID | 101002038 | ||
Gene Name | SOX18 | ||
Full Name | PREDICTED: transcription factor SOX-18 [Papio anubis]. | ||
Organism | Papio anubis [9555] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003904516 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 84 | 160 | 3.80e-32 | High mobility group box domain |
XP_003904516 | Pfam | PF00505 | IPR009071 | 85 | 153 | 2.40e-24 | High mobility group box domain |
XP_003904516 | Pfam | PF12067 | IPR021934 | 192 | 382 | 1.10e-54 | Sox C-terminal transactivation domain |
XP_003904516 | ProSiteProfiles | PS50118 | IPR009071 | 85 | 153 | 0.00e-00 | High mobility group box domain |
XP_003904516 | ProSiteProfiles | PS51516 | IPR021934 | 263 | 383 | 0.00e-00 | Sox C-terminal transactivation domain |
XP_003904516 | SMART | SM00398 | IPR009071 | 84 | 154 | 4.60e-30 | High mobility group box domain |
XP_003904516 | SUPERFAMILY | SSF47095 | IPR009071 | 75 | 157 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003904516 | PF12067 | 0 | Sox_C_TAD | Sox C-terminal transactivation domain |
XP_003904516 | PF00505 | 1.6e-24 | HMG_box | HMG (high mobility group) box |
XP_003904516 | PF09011 | 1.4e-09 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003904516 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_003904516 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_003904516 | GO:0007275 | biological_process | multicellular organismal development |
XP_003904516 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
XP_003904516 | GO:0005634 | cellular_component | nucleus |
XP_003904516 | GO:0003677 | molecular_function | DNA binding |
XP_003904516 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
59729 | Taeniopygia guttata | 100224917 | 28377 | Anolis carolinensis | 100556585 |
10141 | Cavia porcellus | 100727175 | 10029 | Cricetulus griseus | 100767412 |
43179 | Ictidomys tridecemlineatus | 101973435 | 7897 | Latimeria chalumnae | 102347767 |
10090 | Mus musculus | 20672 | 10116 | Rattus norvegicus | 311723 |
9615 | Canis familiaris | 485984 | 9544 | Macaca mulatta | 694156 |
9913 | Bos taurus | ENSBTAG00000011662 | 9483 | Callithrix jacchus | ENSCJAG00000022379 |
51511 | Ciona savignyi | ENSCSAVG00000008188 | 10020 | Dipodomys ordii | ENSDORG00000008388 |
9371 | Echinops telfairi | ENSETEG00000001816 | 9315 | Macropus eugenii | ENSMEUG00000016410 |
13616 | Monodelphis domestica | ENSMODG00000017052 | 61853 | Nomascus leucogenys | ENSNLEG00000010228 |
9813 | Procavia capensis | ENSPCAG00000015663 | 13735 | Pelodiscus sinensis | ENSPSIG00000009637 |
9598 | Pan troglodytes | ENSPTRG00000030459 | 132908 | Pteropus vampyrus | ENSPVAG00000014320 |
9305 | Sarcophilus harrisii | ENSSHAG00000016686 | 9739 | Tursiops truncatus | ENSTTRG00000005878 |
9103 | Meleagris gallopavo | ENSMGAG00000006624 |