Basic Information | |||
Gene ID | 485984 | ||
Gene Name | SOX18 | ||
Full Name | Uncharacterized protein | ||
Organism | Canis familiaris [9615] |
Cross Reference | |||
UniProt | J9NSH5 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | cfa:485984 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSCAFP00000037654 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 82 | 158 | 2.80e-33 | High mobility group box domain |
ENSCAFP00000037654 | Pfam | PF00505 | IPR009071 | 83 | 151 | 4.20e-25 | High mobility group box domain |
ENSCAFP00000037654 | Pfam | PF12067 | IPR021934 | 190 | 364 | 3.40e-41 | Sox C-terminal transactivation domain |
ENSCAFP00000037654 | ProSiteProfiles | PS50118 | IPR009071 | 83 | 151 | 0.00e-00 | High mobility group box domain |
ENSCAFP00000037654 | ProSiteProfiles | PS51516 | IPR021934 | 241 | 365 | 0.00e-00 | Sox C-terminal transactivation domain |
ENSCAFP00000037654 | SMART | SM00398 | IPR009071 | 82 | 152 | 4.80e-31 | High mobility group box domain |
ENSCAFP00000037654 | SUPERFAMILY | SSF47095 | IPR009071 | 72 | 155 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSCAFP00000037654 | PF12067 | 7.70714e-44 | Sox_C_TAD | Sox C-terminal transactivation domain |
ENSCAFP00000037654 | PF00505 | 2.8e-25 | HMG_box | HMG (high mobility group) box |
ENSCAFP00000037654 | PF09011 | 3.3e-09 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSCAFP00000037654 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSCAFP00000037654 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSCAFP00000037654 | GO:0007275 | biological_process | multicellular organismal development |
ENSCAFP00000037654 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
ENSCAFP00000037654 | GO:0005634 | cellular_component | nucleus |
ENSCAFP00000037654 | GO:0003677 | molecular_function | DNA binding |
ENSCAFP00000037654 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100120206 | 59729 | Taeniopygia guttata | 100224917 |
28377 | Anolis carolinensis | 100556585 | 34638 | Metaseiulus occidentalis | 100908412 |
9555 | Papio anubis | 101002038 | 43179 | Ictidomys tridecemlineatus | 101973435 |
7897 | Latimeria chalumnae | 102347767 | 7029 | Acyrthosiphon pisum | 100165234 |
10141 | Cavia porcellus | 100727175 | 10029 | Cricetulus griseus | 100767412 |
143995 | Megachile rotundata | 100876699 | 10090 | Mus musculus | 20672 |
10116 | Rattus norvegicus | 311723 | 7227 | Drosophila melanogaster | 36575 |
7668 | Strongylocentrotus purpuratus | 587141 | 10020 | Dipodomys ordii | ENSDORG00000008388 |
9315 | Macropus eugenii | ENSMEUG00000016410 | 61853 | Nomascus leucogenys | ENSNLEG00000010228 |
13735 | Pelodiscus sinensis | ENSPSIG00000009637 | 132908 | Pteropus vampyrus | ENSPVAG00000014320 |
9739 | Tursiops truncatus | ENSTTRG00000005878 | 9544 | Macaca mulatta | 694156 |
9913 | Bos taurus | ENSBTAG00000011662 | 7719 | Ciona intestinalis | ENSCING00000007173 |
9483 | Callithrix jacchus | ENSCJAG00000022379 | 51511 | Ciona savignyi | ENSCSAVG00000008188 |
9796 | Equus caballus | ENSECAG00000009206 | 9371 | Echinops telfairi | ENSETEG00000001816 |
9103 | Meleagris gallopavo | ENSMGAG00000006624 | 13616 | Monodelphis domestica | ENSMODG00000017052 |
9813 | Procavia capensis | ENSPCAG00000015663 | 7757 | Petromyzon marinus | ENSPMAG00000009255 |
9598 | Pan troglodytes | ENSPTRG00000030459 | 9305 | Sarcophilus harrisii | ENSSHAG00000016686 |