Basic Information | |||
Gene ID | 101026347 | ||
Gene Name | VSX1 | ||
Full Name | PREDICTED: visual system homeobox 1 isoform 3 [Papio anubis]. | ||
Organism | Papio anubis [9555] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003905223 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 160 | 227 | 1.30e-29 | Homeodomain-like |
XP_003905223 | Pfam | PF00046 | IPR001356 | 165 | 221 | 4.30e-23 | Homeobox domain |
XP_003905223 | ProSitePatterns | PS00027 | IPR017970 | 197 | 220 | - | Homeobox, conserved site |
XP_003905223 | ProSiteProfiles | PS50071 | IPR001356 | 162 | 222 | 0.00e-00 | Homeobox domain |
XP_003905223 | ProSiteProfiles | PS51496 | IPR023339 | 224 | 277 | 0.00e-00 | CVC domain |
XP_003905223 | SMART | SM00389 | IPR001356 | 164 | 226 | 2.60e-28 | Homeobox domain |
XP_003905223 | SUPERFAMILY | SSF46689 | IPR009057 | 147 | 224 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003905223 | PF00046 | 2.8e-23 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003905223 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_003905223 | GO:0007601 | biological_process | visual perception |
XP_003905223 | GO:0050896 | biological_process | response to stimulus |
XP_003905223 | GO:0060040 | biological_process | retinal bipolar neuron differentiation |
XP_003905223 | GO:0005634 | cellular_component | nucleus |
XP_003905223 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_003905223 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10029 | Cricetulus griseus | 100769470 | 9597 | Pan paniscus | 100991250 |
31033 | Takifugu rubripes | 101076798 | 9685 | Felis catus | 101090343 |
9595 | Gorilla gorilla | 101124735 | 6087 | Hydra magnipapillata | 101235096 |
9669 | Mustela putorius furo | 101675354 | 43179 | Ictidomys tridecemlineatus | 101961651 |
7897 | Latimeria chalumnae | 102355593 | 10090 | Mus musculus | 114889 |
6239 | Caenorhabditis elegans | 175811 | 9913 | Bos taurus | 286802 |
9598 | Pan troglodytes | 741063 | 9358 | Choloepus hoffmanni | ENSCHOG00000002739 |
10141 | Cavia porcellus | ENSCPOG00000003951 | 9361 | Dasypus novemcinctus | ENSDNOG00000002981 |
10020 | Dipodomys ordii | ENSDORG00000005490 | 9796 | Equus caballus | ENSECAG00000003028 |
9365 | Erinaceus europaeus | ENSEEUG00000004886 | 69293 | Gasterosteus aculeatus | ENSGACG00000012138 |
9031 | Gallus gallus | ENSGALG00000029057 | 8049 | Gadus morhua | ENSGMOG00000017612 |
9785 | Loxodonta africana | ENSLAFG00000018392 | 9315 | Macropus eugenii | ENSMEUG00000003138 |
30608 | Microcebus murinus | ENSMICG00000002047 | 59463 | Myotis lucifugus | ENSMLUG00000007341 |
9544 | Macaca mulatta | ENSMMUG00000020600 | 61853 | Nomascus leucogenys | ENSNLEG00000015558 |
9986 | Oryctolagus cuniculus | ENSOCUG00000017055 | 8128 | Oreochromis niloticus | ENSONIG00000007081 |
9978 | Ochotona princeps | ENSOPRG00000001494 | 13735 | Pelodiscus sinensis | ENSPSIG00000003555 |
42254 | Sorex araneus | ENSSARG00000013745 | 9305 | Sarcophilus harrisii | ENSSHAG00000017959 |
37347 | Tupaia belangeri | ENSTBEG00000014757 | 59729 | Taeniopygia guttata | ENSTGUG00000005139 |
99883 | Tetraodon nigroviridis | ENSTNIG00000013369 | 9739 | Tursiops truncatus | ENSTTRG00000001632 |
28377 | Anolis carolinensis | ENSACAG00000013710 | 9103 | Meleagris gallopavo | ENSMGAG00000007153 |
30611 | Otolemur garnettii | ENSOGAG00000008500 | 9823 | Sus scrofa | ENSSSCG00000023887 |