Basic Information
Gene ID 114889 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Vsx1; Rinx
Full Name Visual system homeobox 1
Organism Mus musculus [10090]

Cross Reference
UniProt Q91V10 UniGene Mm.207061
PDB NULL OMIM NULL
KEGG mmu:114889 UCSC uc008muh.2

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 10090.ENSMUSP00000039088

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSMUSP00000039088 Gene3D G3DSA:1.10.10.60 IPR009057 168 234 2.90e-29 Homeodomain-like
ENSMUSP00000039088 Pfam PF00046 IPR001356 172 228 2.60e-23 Homeobox domain
ENSMUSP00000039088 ProSitePatterns PS00027 IPR017970 204 227 - Homeobox, conserved site
ENSMUSP00000039088 ProSiteProfiles PS50071 IPR001356 169 229 0.00e-00 Homeobox domain
ENSMUSP00000039088 ProSiteProfiles PS51496 IPR023339 231 283 0.00e-00 CVC domain
ENSMUSP00000039088 SMART SM00389 IPR001356 171 233 6.80e-29 Homeobox domain
ENSMUSP00000039088 SUPERFAMILY SSF46689 IPR009057 152 231 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSMUSP00000039088 PF00046 1.7e-23 Homeobox Homeobox domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSMUSP00000039088 GO:0006351 biological_process transcription, DNA-templated
ENSMUSP00000039088 GO:0007601 biological_process visual perception
ENSMUSP00000039088 GO:0050896 biological_process response to stimulus
ENSMUSP00000039088 GO:0060040 biological_process retinal bipolar neuron differentiation
ENSMUSP00000039088 GO:0005634 cellular_component nucleus
ENSMUSP00000039088 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSMUSP00000039088 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9597 Pan paniscus 100991250 9555 Papio anubis 101026347
9685 Felis catus 101090343 6087 Hydra magnipapillata 101235096
43179 Ictidomys tridecemlineatus 101961651 10029 Cricetulus griseus 100769470
31033 Takifugu rubripes 101076798 9595 Gorilla gorilla 101124735
9669 Mustela putorius furo 101675354 7897 Latimeria chalumnae 102355593
6239 Caenorhabditis elegans 175811 9913 Bos taurus 286802
9598 Pan troglodytes 741063 9358 Choloepus hoffmanni ENSCHOG00000002739
9361 Dasypus novemcinctus ENSDNOG00000002981 9796 Equus caballus ENSECAG00000003028
9365 Erinaceus europaeus ENSEEUG00000004886 69293 Gasterosteus aculeatus ENSGACG00000012138
9031 Gallus gallus ENSGALG00000029057 9315 Macropus eugenii ENSMEUG00000003138
59463 Myotis lucifugus ENSMLUG00000007341 9544 Macaca mulatta ENSMMUG00000020600
61853 Nomascus leucogenys ENSNLEG00000015558 9986 Oryctolagus cuniculus ENSOCUG00000017055
9978 Ochotona princeps ENSOPRG00000001494 13735 Pelodiscus sinensis ENSPSIG00000003555
9305 Sarcophilus harrisii ENSSHAG00000017959 59729 Taeniopygia guttata ENSTGUG00000005139
9739 Tursiops truncatus ENSTTRG00000001632 7227 Drosophila melanogaster 31469
28377 Anolis carolinensis ENSACAG00000013710 10141 Cavia porcellus ENSCPOG00000003951
10020 Dipodomys ordii ENSDORG00000005490 8049 Gadus morhua ENSGMOG00000017612
9785 Loxodonta africana ENSLAFG00000018392 9103 Meleagris gallopavo ENSMGAG00000007153
30608 Microcebus murinus ENSMICG00000002047 30611 Otolemur garnettii ENSOGAG00000008500
8128 Oreochromis niloticus ENSONIG00000007081 42254 Sorex araneus ENSSARG00000013745
9823 Sus scrofa ENSSSCG00000023887 37347 Tupaia belangeri ENSTBEG00000014757
99883 Tetraodon nigroviridis ENSTNIG00000013369